| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is hipO [H]
Identifier: 222102578
GI number: 222102578
Start: 184832
End: 186025
Strand: Reverse
Name: hipO [H]
Synonym: Avi_7215
Alternate gene names: 222102578
Gene position: 186025-184832 (Counterclockwise)
Preceding gene: 222102579
Following gene: 222102577
Centisome position: 29.44
GC content: 59.13
Gene sequence:
>1194_bases GTGACCTCCTCTCCAGACCCACTACCGTCTCCACATGTGATTGATCGCATAGCCAGCTATACACCAGAGCTGACAGCTAT CCGCCACGACATTCACCAGCACCCGGAAATCGGGTTCGAAGAGGTCCGAACGTCAGGCATTGTCGCCGAAAAGCTCACCT CATGGGGCATTGAGGTGCATCGCGGCTATGGCAAAACCGGCGTGGTGGGACGCTTGCGCGGCAAACACGCTGGCAACCGC TCCATAGGGCTGCGCGCGGATATGGATGCCCTGCCGATGCCAGAGGAAACAGGGCTGCCGTTTGCCTCCGTCTATCCCGG CAAGTTTCACGGCTGCGGCCATGATGTGCACACCACCATCTTGCTGGGCGCGGCCCGCTATCTGGCAGAAACCCGCGATT TTGCGGGCACGGTCACCTTCATTTTTCAGCCCGCCGAGGAAGGGCTTGGCGGCGCGAGGGCGATGATTGCTGATGGTTTG TTCAAGGATTTTCCGGTTGATGAAATCTATGGGCTGCACAATTCATCCTATTCTCCACCCAATCACTTGAGAGTATCGCC GGGTGCCGCTATGGCCGGGGCCGATTTCTTTGATATCACCTTGCGCGGCAAGGGTGCGCATGCTGCCCATCCCGATTTGG GGCGTGATCCCATTCCGGCCGTTGGTGAGTTGATTCAGGCCCTACAAACCATTGTGAGCCGCAATGTTCCGCCCACCGAT CCTGCCGTGTTGTCGATCACCCGGATTGAAGGCGGATCAGCCTATAATGTCATTCCCGAAACCGCCTCGATTGCCGGAAC GGTACGGGCCTTTTCCGATGAGGTGCGGCAAACCATTCGCACCCGCATCACCGAAATTTCCAATCACATTGCCGCCGCTC ACGGGCTGACAGCCACGGTGGATATTCGCGACATTTTCTCCGTGCTCACCAACAATGACACAGCAGTTGAGGCTGTGGTG TCTGTTGCCCGCGAGGTGCTGGGGGATGCACGGGTCTCCACCCAACCCTATCGCACCATGGGCAGCGAGGATTTCGCCGA CTTGCTCAAGCACGCCCCCGGTGCGTTTTTCACCCTCGGCCACAGCGGCACGGTGCCCGCCCACAATCCCGGCTTCATTG TTGATGATGCCATTCTGCCCGTCGGGGCAACCCTGTTTTCCCGGCTGGTGGAAAGCAGGCTGAAGGCCGCCTGA
Upstream 100 bases:
>100_bases GGGTTGCGGCTCTGAACGGCAATGTCATTCATCAGCCACGGGCGCAAGCGTCCTTGGCCCTCGCCCATTTTATCAAGCCC CTTCATCCAAGGATAGATTT
Downstream 100 bases:
>100_bases TCAAAACAAACCCTTTCAAAAACACAATAAATGAGGACACCCATGACCATCACCCTAACCCGCCGCAAGGCTTTGTTGCT CGGTGCCGCCCTTGGTGGCT
Product: hippurate hydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTSSPDPLPSPHVIDRIASYTPELTAIRHDIHQHPEIGFEEVRTSGIVAEKLTSWGIEVHRGYGKTGVVGRLRGKHAGNR SIGLRADMDALPMPEETGLPFASVYPGKFHGCGHDVHTTILLGAARYLAETRDFAGTVTFIFQPAEEGLGGARAMIADGL FKDFPVDEIYGLHNSSYSPPNHLRVSPGAAMAGADFFDITLRGKGAHAAHPDLGRDPIPAVGELIQALQTIVSRNVPPTD PAVLSITRIEGGSAYNVIPETASIAGTVRAFSDEVRQTIRTRITEISNHIAAAHGLTATVDIRDIFSVLTNNDTAVEAVV SVAREVLGDARVSTQPYRTMGSEDFADLLKHAPGAFFTLGHSGTVPAHNPGFIVDDAILPVGATLFSRLVESRLKAA
Sequences:
>Translated_397_residues MTSSPDPLPSPHVIDRIASYTPELTAIRHDIHQHPEIGFEEVRTSGIVAEKLTSWGIEVHRGYGKTGVVGRLRGKHAGNR SIGLRADMDALPMPEETGLPFASVYPGKFHGCGHDVHTTILLGAARYLAETRDFAGTVTFIFQPAEEGLGGARAMIADGL FKDFPVDEIYGLHNSSYSPPNHLRVSPGAAMAGADFFDITLRGKGAHAAHPDLGRDPIPAVGELIQALQTIVSRNVPPTD PAVLSITRIEGGSAYNVIPETASIAGTVRAFSDEVRQTIRTRITEISNHIAAAHGLTATVDIRDIFSVLTNNDTAVEAVV SVAREVLGDARVSTQPYRTMGSEDFADLLKHAPGAFFTLGHSGTVPAHNPGFIVDDAILPVGATLFSRLVESRLKAA >Mature_396_residues TSSPDPLPSPHVIDRIASYTPELTAIRHDIHQHPEIGFEEVRTSGIVAEKLTSWGIEVHRGYGKTGVVGRLRGKHAGNRS IGLRADMDALPMPEETGLPFASVYPGKFHGCGHDVHTTILLGAARYLAETRDFAGTVTFIFQPAEEGLGGARAMIADGLF KDFPVDEIYGLHNSSYSPPNHLRVSPGAAMAGADFFDITLRGKGAHAAHPDLGRDPIPAVGELIQALQTIVSRNVPPTDP AVLSITRIEGGSAYNVIPETASIAGTVRAFSDEVRQTIRTRITEISNHIAAAHGLTATVDIRDIFSVLTNNDTAVEAVVS VAREVLGDARVSTQPYRTMGSEDFADLLKHAPGAFFTLGHSGTVPAHNPGFIVDDAILPVGATLFSRLVESRLKAA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=426, Percent_Identity=26.5258215962441, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1787598, Length=298, Percent_Identity=28.5234899328859, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 42349; Mature: 42218
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSPDPLPSPHVIDRIASYTPELTAIRHDIHQHPEIGFEEVRTSGIVAEKLTSWGIEVH CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEE RGYGKTGVVGRLRGKHAGNRSIGLRADMDALPMPEETGLPFASVYPGKFHGCGHDVHTTI CCCCCCCCEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHH LLGAARYLAETRDFAGTVTFIFQPAEEGLGGARAMIADGLFKDFPVDEIYGLHNSSYSPP HHHHHHHHHHHHHCCCEEEEEEECHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC NHLRVSPGAAMAGADFFDITLRGKGAHAAHPDLGRDPIPAVGELIQALQTIVSRNVPPTD CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PAVLSITRIEGGSAYNVIPETASIAGTVRAFSDEVRQTIRTRITEISNHIAAAHGLTATV CCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE DIRDIFSVLTNNDTAVEAVVSVAREVLGDARVSTQPYRTMGSEDFADLLKHAPGAFFTLG EHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHCCCCEEEEC HSGTVPAHNPGFIVDDAILPVGATLFSRLVESRLKAA CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSSPDPLPSPHVIDRIASYTPELTAIRHDIHQHPEIGFEEVRTSGIVAEKLTSWGIEVH CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEE RGYGKTGVVGRLRGKHAGNRSIGLRADMDALPMPEETGLPFASVYPGKFHGCGHDVHTTI CCCCCCCCEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHH LLGAARYLAETRDFAGTVTFIFQPAEEGLGGARAMIADGLFKDFPVDEIYGLHNSSYSPP HHHHHHHHHHHHHCCCEEEEEEECHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC NHLRVSPGAAMAGADFFDITLRGKGAHAAHPDLGRDPIPAVGELIQALQTIVSRNVPPTD CCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PAVLSITRIEGGSAYNVIPETASIAGTVRAFSDEVRQTIRTRITEISNHIAAAHGLTATV CCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE DIRDIFSVLTNNDTAVEAVVSVAREVLGDARVSTQPYRTMGSEDFADLLKHAPGAFFTLG EHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHCCCCEEEEC HSGTVPAHNPGFIVDDAILPVGATLFSRLVESRLKAA CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]