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The map label for this gene is appB [H]

Identifier: 222102559

GI number: 222102559

Start: 158780

End: 159760

Strand: Reverse

Name: appB [H]

Synonym: Avi_7193

Alternate gene names: 222102559

Gene position: 159760-158780 (Counterclockwise)

Preceding gene: 222102560

Following gene: 222102558

Centisome position: 25.29

GC content: 56.27

Gene sequence:

>981_bases
ATGGCAGGTTTTATTCTCAGACGGTTTTTTCAATCCATAGGCGTCATGCTGGCGGTGGCGCTGATTGCCTTTGCTGTGAT
CCGCTTTGTTGGCGATCCCTTGGAATCGCTGACCAGTCAGGAAACGCGGCTGGATGAAAGGGTTGAGCTTAAGGCGCGGC
TTGGTTTGGATCAGCCCGTGCCCATCCAGTTTCTCACCTTTCTCAAGCGCGGCATCAGCGGCGATTTCGGCACGTCCTAC
AAACAGCAAGAACCTGTCACCCGGATGATTTTTGAACGATTGCCCGCCACGCTGGAGCTTGCCACGGCATCCAGCCTGAT
TGCGCTGCTGTTTGGCGGTCTTTTCGGCGTTTATTGTGCTTTGCGGCCCAAGGGTGTTTTGACCCATGCAATCATGACCC
TGTCGCTGGTTGGTGTTTCGCTGCCCACGTTTTTAATCGGCATTGGCCTGATCGCAGTCTTTTCGGTGCAGCTTGGCTGG
CTGCCGTCTTTCGGACGGGGTGAAACGGTCAAGCTTGGCTGGTGGACCACGGGCCTTTTGACCCTTTCGGGCTGGCGCTC
GCTGATCTTGCCCGCCATCACCCTGTCGCTCTTTCAGATGACCATGCTGATGCGGCTGATCCGGGCAGAAATGCTGGAGG
TGCTGCGGCAGGATTATATCCGCTTTGCCCGCGCCAGAGGCCTGTCCCGCCGCAGCATCCACTTTGGTCATGCTTTGAAA
AATACGCTGGTGCCGGTCATCACTGTGGCTGGCCTGCAATTTGGCTCGGTCATCGCCTTTGCCGTGGTGACGGAGACGGT
GTTTCAATGGCCGGGTGTTGGCTCCCTGTTCATCAATTCGGTGCAGTCCGTGGATGTGCCAGTGATGGCGGCTTATCTGG
TGTTTATCTCGGCTCTGTTTGTGCTCATCAATCTGATTGTTGATGGCCTCTATTACGCTGTTGATCCGCGTTTGCGGATT
GTGCGCACGGGCACGGAGTGA

Upstream 100 bases:

>100_bases
TCACCCCGCCCAATGGGGGTGGGATAATCTTGTAAGGCAATACATTGACAGCGCCGAGCGGTTTCTCAAACGCCCGGCGC
TGGATGATTGGATAGGATGC

Downstream 100 bases:

>100_bases
TGCCATGACCACCCAAACCCTACGTCCTTTTTCGAAACGCCACAGGTGGCGCAGGATTTCCCCCGTCACGATCTTGGCGG
GTGCCTTGGCCGTCGTGTTG

Product: ABC transporter membrane spanning protein (oligopeptide)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MAGFILRRFFQSIGVMLAVALIAFAVIRFVGDPLESLTSQETRLDERVELKARLGLDQPVPIQFLTFLKRGISGDFGTSY
KQQEPVTRMIFERLPATLELATASSLIALLFGGLFGVYCALRPKGVLTHAIMTLSLVGVSLPTFLIGIGLIAVFSVQLGW
LPSFGRGETVKLGWWTTGLLTLSGWRSLILPAITLSLFQMTMLMRLIRAEMLEVLRQDYIRFARARGLSRRSIHFGHALK
NTLVPVITVAGLQFGSVIAFAVVTETVFQWPGVGSLFINSVQSVDVPVMAAYLVFISALFVLINLIVDGLYYAVDPRLRI
VRTGTE

Sequences:

>Translated_326_residues
MAGFILRRFFQSIGVMLAVALIAFAVIRFVGDPLESLTSQETRLDERVELKARLGLDQPVPIQFLTFLKRGISGDFGTSY
KQQEPVTRMIFERLPATLELATASSLIALLFGGLFGVYCALRPKGVLTHAIMTLSLVGVSLPTFLIGIGLIAVFSVQLGW
LPSFGRGETVKLGWWTTGLLTLSGWRSLILPAITLSLFQMTMLMRLIRAEMLEVLRQDYIRFARARGLSRRSIHFGHALK
NTLVPVITVAGLQFGSVIAFAVVTETVFQWPGVGSLFINSVQSVDVPVMAAYLVFISALFVLINLIVDGLYYAVDPRLRI
VRTGTE
>Mature_325_residues
AGFILRRFFQSIGVMLAVALIAFAVIRFVGDPLESLTSQETRLDERVELKARLGLDQPVPIQFLTFLKRGISGDFGTSYK
QQEPVTRMIFERLPATLELATASSLIALLFGGLFGVYCALRPKGVLTHAIMTLSLVGVSLPTFLIGIGLIAVFSVQLGWL
PSFGRGETVKLGWWTTGLLTLSGWRSLILPAITLSLFQMTMLMRLIRAEMLEVLRQDYIRFARARGLSRRSIHFGHALKN
TLVPVITVAGLQFGSVIAFAVVTETVFQWPGVGSLFINSVQSVDVPVMAAYLVFISALFVLINLIVDGLYYAVDPRLRIV
RTGTE

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=35, Blast_Score=201, Evalue=7e-53,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=35.4166666666667, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1789888, Length=323, Percent_Identity=34.3653250773994, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI1787497, Length=321, Percent_Identity=32.7102803738318, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1787761, Length=335, Percent_Identity=37.6119402985075, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI1787550, Length=260, Percent_Identity=33.4615384615385, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788504, Length=296, Percent_Identity=27.027027027027, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35956; Mature: 35825

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFILRRFFQSIGVMLAVALIAFAVIRFVGDPLESLTSQETRLDERVELKARLGLDQPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCCCC
PIQFLTFLKRGISGDFGTSYKQQEPVTRMIFERLPATLELATASSLIALLFGGLFGVYCA
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH
LRPKGVLTHAIMTLSLVGVSLPTFLIGIGLIAVFSVQLGWLPSFGRGETVKLGWWTTGLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHH
TLSGWRSLILPAITLSLFQMTMLMRLIRAEMLEVLRQDYIRFARARGLSRRSIHFGHALK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
NTLVPVITVAGLQFGSVIAFAVVTETVFQWPGVGSLFINSVQSVDVPVMAAYLVFISALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
VLINLIVDGLYYAVDPRLRIVRTGTE
HHHHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure 
AGFILRRFFQSIGVMLAVALIAFAVIRFVGDPLESLTSQETRLDERVELKARLGLDQPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCCCC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HHHHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]