| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
Click here to switch to the map view.
The map label for this gene is 222102548
Identifier: 222102548
GI number: 222102548
Start: 145969
End: 147003
Strand: Reverse
Name: 222102548
Synonym: Avi_7180
Alternate gene names: NA
Gene position: 147003-145969 (Counterclockwise)
Preceding gene: 222102549
Following gene: 222102547
Centisome position: 23.27
GC content: 59.71
Gene sequence:
>1035_bases ATGGTCACTCCCATCTCCAAACTCTGGTATACGCGCTGCCCGGTGCCAACGCCCGTGGGGCTTGCTGCCCAGCTTGGCTA TCTTGAACAAAGCTTTGCCGAGATTGGCATCACACTGGAGTCCATCATTGATTCCCCCGATAAAGCCGTCCGGCAGAGCC ATTTCAACCATACGCTGGAATGGTCTTTCCGCCATGGCGGCAACGTGCCACCCATCCGCGCCCGCTCTGAAGGCCGCAAC ACCCGGCTGGTGGGCATTACCTGGACCGATGAGTTTCAGGCCATCATCACCCTGCCGCAGACTGGCATAAAAAGCCTGAA GGACCTTGTTGGCCGTCGGTTTGGCGTGCCAAAGCGACCGGATGGGATTGTTGATTTTATGCGCGCAACCGCCCTGAAAG GCCTTGTCTCGGCTCTGTCGCTGGACGGGGTTTCGATCAACGCGGTTGATCTGACTGACATCACCATCACTGAGTCCGTG CTGGATGGACAAACTGGCGCATCGCTGTTTGGCCTGAAACGGCGCCAATCCTTTGGCGAGGAGGCCGCAGCCCTGTTGCG TGGCGAGGTGGACGCGATTTTTGTGAAAGGCACGGCGGGCATTGCCGTTGCCAATCTGATTGGCGCGGTGACGGTCTCTG ACTTCGGTTTTCATCCCGACCCAACCATCCGCATCAATTCCGGCTCACCGCGCATTCTCACGGTGGATGCAAGACTGGCC GATGAACGCCCCGATCTGGTGGAGCGGCTGATTGCGGTGATCCGCAAGGCCTCCGGCTGGGCGGAGGCACACCCGGACGA GACGCGCCGCTTCATTGCCCGCGAGGCGGGAGCCAGCGAAGAGCAGGTGCTGGCCGCCAATGGGCGGGATGTGCATCGCC ATCTCGGCATCGGGCTGGAGCCTGCCCATGTGGCTGCTGTGAAGCATTATAAGGATTTTCTGTATCAATGGGGCTTCTTG CAGGCTGATTTTGACCTCGAGGCCTGGGTGGATCAGCGCCCTTATGAAACGCTGGATCGGAGGGCTGTTGCATGA
Upstream 100 bases:
>100_bases CAGCCTCGCCTTCGCCTATATCGCGTCAACGTAAGGCTGGATTTCTCAAGGTTTTCGCCGGGCGTTGAGCCGGTTTCATC TCCTGTTTGTTGAGGATATT
Downstream 100 bases:
>100_bases GTGCCACCGTTTCTGCCATCAAGCCCAATGCGGCACCAAGCCCTGATCCGGTCGAGATCGCACGGGAACTGGCGCGCGAT TTCGCAACGCGTGCCGCCGA
Product: desulfurizing enzyme
Products: NA
Alternate protein names: Desulfurizing; Monooxygenase; Desulfurization; 2-(2-Hydroxyphenyl)Benzenesulfinate Hydrolase; 2-Hydroxybiphenyl-2-Sulfinate Desulfinase; Desulfurization B
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVTPISKLWYTRCPVPTPVGLAAQLGYLEQSFAEIGITLESIIDSPDKAVRQSHFNHTLEWSFRHGGNVPPIRARSEGRN TRLVGITWTDEFQAIITLPQTGIKSLKDLVGRRFGVPKRPDGIVDFMRATALKGLVSALSLDGVSINAVDLTDITITESV LDGQTGASLFGLKRRQSFGEEAAALLRGEVDAIFVKGTAGIAVANLIGAVTVSDFGFHPDPTIRINSGSPRILTVDARLA DERPDLVERLIAVIRKASGWAEAHPDETRRFIAREAGASEEQVLAANGRDVHRHLGIGLEPAHVAAVKHYKDFLYQWGFL QADFDLEAWVDQRPYETLDRRAVA
Sequences:
>Translated_344_residues MVTPISKLWYTRCPVPTPVGLAAQLGYLEQSFAEIGITLESIIDSPDKAVRQSHFNHTLEWSFRHGGNVPPIRARSEGRN TRLVGITWTDEFQAIITLPQTGIKSLKDLVGRRFGVPKRPDGIVDFMRATALKGLVSALSLDGVSINAVDLTDITITESV LDGQTGASLFGLKRRQSFGEEAAALLRGEVDAIFVKGTAGIAVANLIGAVTVSDFGFHPDPTIRINSGSPRILTVDARLA DERPDLVERLIAVIRKASGWAEAHPDETRRFIAREAGASEEQVLAANGRDVHRHLGIGLEPAHVAAVKHYKDFLYQWGFL QADFDLEAWVDQRPYETLDRRAVA >Mature_344_residues MVTPISKLWYTRCPVPTPVGLAAQLGYLEQSFAEIGITLESIIDSPDKAVRQSHFNHTLEWSFRHGGNVPPIRARSEGRN TRLVGITWTDEFQAIITLPQTGIKSLKDLVGRRFGVPKRPDGIVDFMRATALKGLVSALSLDGVSINAVDLTDITITESV LDGQTGASLFGLKRRQSFGEEAAALLRGEVDAIFVKGTAGIAVANLIGAVTVSDFGFHPDPTIRINSGSPRILTVDARLA DERPDLVERLIAVIRKASGWAEAHPDETRRFIAREAGASEEQVLAANGRDVHRHLGIGLEPAHVAAVKHYKDFLYQWGFL QADFDLEAWVDQRPYETLDRRAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37706; Mature: 37706
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTPISKLWYTRCPVPTPVGLAAQLGYLEQSFAEIGITLESIIDSPDKAVRQSHFNHTLE CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCEEE WSFRHGGNVPPIRARSEGRNTRLVGITWTDEFQAIITLPQTGIKSLKDLVGRRFGVPKRP EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCC DGIVDFMRATALKGLVSALSLDGVSINAVDLTDITITESVLDGQTGASLFGLKRRQSFGE CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEHHHHCCCCCCHHHHHHHHHHHHH EAAALLRGEVDAIFVKGTAGIAVANLIGAVTVSDFGFHPDPTIRINSGSPRILTVDARLA HHHHHHHCCCEEEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEECCCCCEEEEEECCCC DERPDLVERLIAVIRKASGWAEAHPDETRRFIAREAGASEEQVLAANGRDVHRHLGIGLE CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCC PAHVAAVKHYKDFLYQWGFLQADFDLEAWVDQRPYETLDRRAVA HHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MVTPISKLWYTRCPVPTPVGLAAQLGYLEQSFAEIGITLESIIDSPDKAVRQSHFNHTLE CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCEEE WSFRHGGNVPPIRARSEGRNTRLVGITWTDEFQAIITLPQTGIKSLKDLVGRRFGVPKRP EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCC DGIVDFMRATALKGLVSALSLDGVSINAVDLTDITITESVLDGQTGASLFGLKRRQSFGE CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEHHHHCCCCCCHHHHHHHHHHHHH EAAALLRGEVDAIFVKGTAGIAVANLIGAVTVSDFGFHPDPTIRINSGSPRILTVDARLA HHHHHHHCCCEEEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEECCCCCEEEEEECCCC DERPDLVERLIAVIRKASGWAEAHPDETRRFIAREAGASEEQVLAANGRDVHRHLGIGLE CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCC PAHVAAVKHYKDFLYQWGFLQADFDLEAWVDQRPYETLDRRAVA HHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA