Click here to switch to the map view.

The map label for this gene is gsiB [H]

Identifier: 222102546

GI number: 222102546

Start: 142458

End: 144089

Strand: Reverse

Name: gsiB [H]

Synonym: Avi_7175

Alternate gene names: 222102546

Gene position: 144089-142458 (Counterclockwise)

Preceding gene: 222102547

Following gene: 222102545

Centisome position: 22.81

GC content: 55.51

Gene sequence:

>1632_bases
ATGATGACGCTTCGCCGCACTTTTCTTGGCCTCAGCCTCGCGCTGGCCGCTTCTGTAAGCCTATCGACCATCGGCCATGC
ATCTGATGCGCCGGTCAAGGGCGGAACCTTGGTCTATCTTGAGCAGCAGGCGCATACCAATCTTTACCCACCAGCAGGCG
GCTTTTACCCCAACAGCGGCATTCTCAACCAGATCACCGATAAGCTGACCTATCAAAACCCCAAGACACTGGAAATCGAG
CCGTGGATTGCCGAGAGCTGGACGGTCAATGCCGATAACACGGAATATACCTTCAAAATCCGCCCCGGCGTGACGTTCTC
CGATGGCTCCCCGGTGGACGCCAATGCGGTGGCCAAAAACTTTGATCGCTTCGGGCTTGGCGATAAGGGTTTGAAGCAGC
CGGTTTCGGAAGTGGTCAACAATTACGACCACAGTGAAGTGATTGACCCGCTGACGGTGAAATTCGTGTTCAAAAAGCCG
TCGCCGGGCTTTCTTCAGGGAACATCCGTTATCGGCTCCGGTCTGTTGTCGTTGAAAACACTCTCCCTGCCCTTTGAGCA
ATTGGGCGATGCCACCAAAATCATCGGCTCCGGCCCCTTTGTGGTCAGCGCCGAGACGCTTGGCAAATCGCTCGATTTGA
AAGTGCGGGCCGATTACACTTGGGGTCCGAAAAAGCTGGAGCATCAGGGCCGCGCCTATCTCGATGGCATCAAATATATC
ATCACCCGTGAAGATGGCGTGCGCATTGGCGCGCTTCTGGCCGGTCAGGCCGATCTGATCCGCCAGATTCAGGCCTATGA
TGAGGCACAGGTTGAAACGCAGAATTTCAAGATTTATGCGCCCGGCACCCGCGGCGTGAACAATTCGGTGGTGTTCAGAC
CAGACAATCCGTTGGTTGCTGATGTGCGGGTGCGCAAGGCGCTGTCTTTGGCCACCAACCGCGATGAAATCATCAAGACC
CTATTCTCCAAGAACTATCCACGCGCCACCTCCATCATCGCCTCCACGGCCATTGGCTATGTCGATCAATCCGACAAATT
GGGCTTTGATGTTGAGAAGGCCAAGGCTCTGCTGGATGAAGCCGGATATAAGCCAGATGCCGATGGCATTCGTGCCAAGG
ACGGGGCAAAACTGGTGCTGACAGCCTATGAATCCCTGCCGCAACCGCAAAACCGCGCGGCTTTGCAGCTGATTGCCCAG
CAATGGCAAAAAGTGGGCGTGAAGCTCAACGTGCTGGCCGGCGACGCGGGAAGCGCCGCTTTGGATGATCTTGATCCGCT
GAAAACCCCGGTGACTCCTGCCATCGTTGGTCGCGCCGACCCGGATGTGATCAAGAGCCAATATTACCCGAAAAACCGCG
ACGCGCTGCGTCAGAAGGGTGGTCTCAGCGATAAAGCCAAGACCTTTGTTGATGATAAGCTCAATAGCTTACTGGAGGAG
ATCAGCTCTCAACCTGATCCACAGAAGCGATTGAAGGTTGTGGCAGAGGTACAGGCCTATGTGCTCGATCAGGCCTATGC
CATCCCGATTTTTGAAGAGCCGCAAGTCTTTGCCGGAGCGCCTTACGTGAAGGGTGTGGCTTTTGATGCCGTGGCCCGCC
CCAGCTTCTACAGCGTCTGGCTGGATAAGTAA

Upstream 100 bases:

>100_bases
TTGAAAATTAGAATAGTAAATCAATAGACAATATTGATTGCAACACGCAAAAGTTTACCCTTGGTCCACGGGTTCATTCA
CTCACTACCCAGGGACATTG

Downstream 100 bases:

>100_bases
TGGTCAGCACCCGGGTGACAGCAACAGCCGCCACCCGGTTTTGAAATCTGCGGAGATCGATGATGACGCGATATGTTGCA
AGCCGGATAGGACAGGCGGT

Product: ABC transporter substrate binding protein (oligopeptide)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MMTLRRTFLGLSLALAASVSLSTIGHASDAPVKGGTLVYLEQQAHTNLYPPAGGFYPNSGILNQITDKLTYQNPKTLEIE
PWIAESWTVNADNTEYTFKIRPGVTFSDGSPVDANAVAKNFDRFGLGDKGLKQPVSEVVNNYDHSEVIDPLTVKFVFKKP
SPGFLQGTSVIGSGLLSLKTLSLPFEQLGDATKIIGSGPFVVSAETLGKSLDLKVRADYTWGPKKLEHQGRAYLDGIKYI
ITREDGVRIGALLAGQADLIRQIQAYDEAQVETQNFKIYAPGTRGVNNSVVFRPDNPLVADVRVRKALSLATNRDEIIKT
LFSKNYPRATSIIASTAIGYVDQSDKLGFDVEKAKALLDEAGYKPDADGIRAKDGAKLVLTAYESLPQPQNRAALQLIAQ
QWQKVGVKLNVLAGDAGSAALDDLDPLKTPVTPAIVGRADPDVIKSQYYPKNRDALRQKGGLSDKAKTFVDDKLNSLLEE
ISSQPDPQKRLKVVAEVQAYVLDQAYAIPIFEEPQVFAGAPYVKGVAFDAVARPSFYSVWLDK

Sequences:

>Translated_543_residues
MMTLRRTFLGLSLALAASVSLSTIGHASDAPVKGGTLVYLEQQAHTNLYPPAGGFYPNSGILNQITDKLTYQNPKTLEIE
PWIAESWTVNADNTEYTFKIRPGVTFSDGSPVDANAVAKNFDRFGLGDKGLKQPVSEVVNNYDHSEVIDPLTVKFVFKKP
SPGFLQGTSVIGSGLLSLKTLSLPFEQLGDATKIIGSGPFVVSAETLGKSLDLKVRADYTWGPKKLEHQGRAYLDGIKYI
ITREDGVRIGALLAGQADLIRQIQAYDEAQVETQNFKIYAPGTRGVNNSVVFRPDNPLVADVRVRKALSLATNRDEIIKT
LFSKNYPRATSIIASTAIGYVDQSDKLGFDVEKAKALLDEAGYKPDADGIRAKDGAKLVLTAYESLPQPQNRAALQLIAQ
QWQKVGVKLNVLAGDAGSAALDDLDPLKTPVTPAIVGRADPDVIKSQYYPKNRDALRQKGGLSDKAKTFVDDKLNSLLEE
ISSQPDPQKRLKVVAEVQAYVLDQAYAIPIFEEPQVFAGAPYVKGVAFDAVARPSFYSVWLDK
>Mature_543_residues
MMTLRRTFLGLSLALAASVSLSTIGHASDAPVKGGTLVYLEQQAHTNLYPPAGGFYPNSGILNQITDKLTYQNPKTLEIE
PWIAESWTVNADNTEYTFKIRPGVTFSDGSPVDANAVAKNFDRFGLGDKGLKQPVSEVVNNYDHSEVIDPLTVKFVFKKP
SPGFLQGTSVIGSGLLSLKTLSLPFEQLGDATKIIGSGPFVVSAETLGKSLDLKVRADYTWGPKKLEHQGRAYLDGIKYI
ITREDGVRIGALLAGQADLIRQIQAYDEAQVETQNFKIYAPGTRGVNNSVVFRPDNPLVADVRVRKALSLATNRDEIIKT
LFSKNYPRATSIIASTAIGYVDQSDKLGFDVEKAKALLDEAGYKPDADGIRAKDGAKLVLTAYESLPQPQNRAALQLIAQ
QWQKVGVKLNVLAGDAGSAALDDLDPLKTPVTPAIVGRADPDVIKSQYYPKNRDALRQKGGLSDKAKTFVDDKLNSLLEE
ISSQPDPQKRLKVVAEVQAYVLDQAYAIPIFEEPQVFAGAPYVKGVAFDAVARPSFYSVWLDK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=424, Percent_Identity=28.5377358490566, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1789966, Length=550, Percent_Identity=26, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789887, Length=548, Percent_Identity=22.0802919708029, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082063, Length=274, Percent_Identity=29.5620437956204, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787762, Length=479, Percent_Identity=23.7995824634656, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59093; Mature: 59093

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLRRTFLGLSLALAASVSLSTIGHASDAPVKGGTLVYLEQQAHTNLYPPAGGFYPNSG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ILNQITDKLTYQNPKTLEIEPWIAESWTVNADNTEYTFKIRPGVTFSDGSPVDANAVAKN
HHHHHHHHHHCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCEEECCCCCCCHHHHHHH
FDRFGLGDKGLKQPVSEVVNNYDHSEVIDPLTVKFVFKKPSPGFLQGTSVIGSGLLSLKT
HHHCCCCCHHHHHHHHHHHCCCCCHHHCCCEEEEEEEECCCCCCEECHHHHHCCHHHHEE
LSLPFEQLGDATKIIGSGPFVVSAETLGKSLDLKVRADYTWGPKKLEHQGRAYLDGIKYI
ECCCHHHHCCHHEEECCCCEEEEHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHCCEEEE
ITREDGVRIGALLAGQADLIRQIQAYDEAQVETQNFKIYAPGTRGVNNSVVFRPDNPLVA
EECCCCCEEEEEECCHHHHHHHHHHHCHHEEEECCEEEECCCCCCCCCCEEECCCCCEEE
DVRVRKALSLATNRDEIIKTLFSKNYPRATSIIASTAIGYVDQSDKLGFDVEKAKALLDE
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AGYKPDADGIRAKDGAKLVLTAYESLPQPQNRAALQLIAQQWQKVGVKLNVLAGDAGSAA
CCCCCCCCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
LDDLDPLKTPVTPAIVGRADPDVIKSQYYPKNRDALRQKGGLSDKAKTFVDDKLNSLLEE
CCCCCCCCCCCCCCEECCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ISSQPDPQKRLKVVAEVQAYVLDQAYAIPIFEEPQVFAGAPYVKGVAFDAVARPSFYSVW
HHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEECCCCCCCEEHHHHCCCCEEEEE
LDK
ECC
>Mature Secondary Structure
MMTLRRTFLGLSLALAASVSLSTIGHASDAPVKGGTLVYLEQQAHTNLYPPAGGFYPNSG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ILNQITDKLTYQNPKTLEIEPWIAESWTVNADNTEYTFKIRPGVTFSDGSPVDANAVAKN
HHHHHHHHHHCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCEEECCCCCCCHHHHHHH
FDRFGLGDKGLKQPVSEVVNNYDHSEVIDPLTVKFVFKKPSPGFLQGTSVIGSGLLSLKT
HHHCCCCCHHHHHHHHHHHCCCCCHHHCCCEEEEEEEECCCCCCEECHHHHHCCHHHHEE
LSLPFEQLGDATKIIGSGPFVVSAETLGKSLDLKVRADYTWGPKKLEHQGRAYLDGIKYI
ECCCHHHHCCHHEEECCCCEEEEHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHCCEEEE
ITREDGVRIGALLAGQADLIRQIQAYDEAQVETQNFKIYAPGTRGVNNSVVFRPDNPLVA
EECCCCCEEEEEECCHHHHHHHHHHHCHHEEEECCEEEECCCCCCCCCCEEECCCCCEEE
DVRVRKALSLATNRDEIIKTLFSKNYPRATSIIASTAIGYVDQSDKLGFDVEKAKALLDE
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AGYKPDADGIRAKDGAKLVLTAYESLPQPQNRAALQLIAQQWQKVGVKLNVLAGDAGSAA
CCCCCCCCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
LDDLDPLKTPVTPAIVGRADPDVIKSQYYPKNRDALRQKGGLSDKAKTFVDDKLNSLLEE
CCCCCCCCCCCCCCEECCCCHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ISSQPDPQKRLKVVAEVQAYVLDQAYAIPIFEEPQVFAGAPYVKGVAFDAVARPSFYSVW
HHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEECCCCCCCEEHHHHCCCCEEEEE
LDK
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA