Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102541

Identifier: 222102541

GI number: 222102541

Start: 137282

End: 137860

Strand: Reverse

Name: 222102541

Synonym: Avi_7170

Alternate gene names: NA

Gene position: 137860-137282 (Counterclockwise)

Preceding gene: 222102542

Following gene: 222102540

Centisome position: 21.82

GC content: 59.07

Gene sequence:

>579_bases
ATGACCGATATTATTGACACTCTCAGCGGCATTGCTCCCGGCTCCAAGGGCGAGGCTTTACGCGCCCGCCGCCCGGTGAC
GAAAGACGGGGCGCAAGCCAGCTGGCAAGCGCTATTTGCACCCGGCGATGATAGCCAGTTTTCAATCGAAGAGCGCTTTG
CCGTTGCTGTTTTTGTGGCGGCCCTGCACGGGCAGCCGGAGATTGCGGCCTTCTACGCGGAAAAGCTTGCGACGAACCCT
GCGCTTCTGAGCGCCATTCAGACCGCTGCATCCAAGGGAACGGCCATTGGGCCTTATGGCCATTATCCCGCCGGGCCGCT
GTCCTCCGAAAACACCGAAGGGCCTGCCTTTACCGTGGCTGACAGCGAAAAAGCCATCCTCGGTGCGCGCTTGAGTGCTG
CGCTGGAACACGCCCATCTTCTGATTTTTCACCTGCGCGATTCCAAGTCACAGGCGCTTGATGCCCTTCTCAAAGCAGGC
TGGAGCACCACCGGCATTGTCACGCTGTCGCAGCTGATTTCTTTCCTCGCCTTTCAGATCCGCGTTGTTGCCGGTCTGAA
AGTCCTGAACGCCACATAA

Upstream 100 bases:

>100_bases
CCACTGAAGTTGCCCCCAAACTGGGCTGGAGCCGCAAGACTTCCAAAGCGCTGGCCGCCGCAGAATAATCCATTGAATTT
AATCAGGAAAGTAAAGTCTG

Downstream 100 bases:

>100_bases
GGACGATCCATCATGACCGACACCATTATCGACCCCAAGGTGGAAAACGCCCCCAATGTCTTCACGCAAGACCAGATCGG
CTGGACACCATGGCTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTDIIDTLSGIAPGSKGEALRARRPVTKDGAQASWQALFAPGDDSQFSIEERFAVAVFVAALHGQPEIAAFYAEKLATNP
ALLSAIQTAASKGTAIGPYGHYPAGPLSSENTEGPAFTVADSEKAILGARLSAALEHAHLLIFHLRDSKSQALDALLKAG
WSTTGIVTLSQLISFLAFQIRVVAGLKVLNAT

Sequences:

>Translated_192_residues
MTDIIDTLSGIAPGSKGEALRARRPVTKDGAQASWQALFAPGDDSQFSIEERFAVAVFVAALHGQPEIAAFYAEKLATNP
ALLSAIQTAASKGTAIGPYGHYPAGPLSSENTEGPAFTVADSEKAILGARLSAALEHAHLLIFHLRDSKSQALDALLKAG
WSTTGIVTLSQLISFLAFQIRVVAGLKVLNAT
>Mature_191_residues
TDIIDTLSGIAPGSKGEALRARRPVTKDGAQASWQALFAPGDDSQFSIEERFAVAVFVAALHGQPEIAAFYAEKLATNPA
LLSAIQTAASKGTAIGPYGHYPAGPLSSENTEGPAFTVADSEKAILGARLSAALEHAHLLIFHLRDSKSQALDALLKAGW
STTGIVTLSQLISFLAFQIRVVAGLKVLNAT

Specific function: Unknown

COG id: COG4950

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20083; Mature: 19952

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIIDTLSGIAPGSKGEALRARRPVTKDGAQASWQALFAPGDDSQFSIEERFAVAVFVA
CCHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ALHGQPEIAAFYAEKLATNPALLSAIQTAASKGTAIGPYGHYPAGPLSSENTEGPAFTVA
HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
DSEKAILGARLSAALEHAHLLIFHLRDSKSQALDALLKAGWSTTGIVTLSQLISFLAFQI
CCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RVVAGLKVLNAT
HHHHHHHHHCCC
>Mature Secondary Structure 
TDIIDTLSGIAPGSKGEALRARRPVTKDGAQASWQALFAPGDDSQFSIEERFAVAVFVA
CHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ALHGQPEIAAFYAEKLATNPALLSAIQTAASKGTAIGPYGHYPAGPLSSENTEGPAFTVA
HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
DSEKAILGARLSAALEHAHLLIFHLRDSKSQALDALLKAGWSTTGIVTLSQLISFLAFQI
CCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RVVAGLKVLNAT
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA