Click here to switch to the map view.

The map label for this gene is 222102524

Identifier: 222102524

GI number: 222102524

Start: 118848

End: 119786

Strand: Direct

Name: 222102524

Synonym: Avi_7152

Alternate gene names: NA

Gene position: 118848-119786 (Clockwise)

Preceding gene: 222102523

Following gene: 222102527

Centisome position: 18.81

GC content: 51.86

Gene sequence:

>939_bases
ATGGATGCGAACGATCACCTTTTGAAGAAGCGGGAGTTTGCCAACCGCTATTTTGATGCCAGCATCTGGAACGACATAAA
ATATCGTGATGGAGATATCGTTGTCGCAAGCTATGCCAAAGCAGGAACGACACTGGTTCAACAGATTATTGCGCAACTCA
TTTTTGATCAGGATGACGAGGTGGACGTGGCGGCTATTTCGCCTTGGATCGATTCAGTCTATCCCGACAAAAAGGTTAAA
CTGGACCTGATCGAGGCGCAAACCCATCGCCGGTTTCTCAAAACACATTTGCCCATGGATGCGCTGATCTTTTCGGAGAA
GGCGAAATATATCTACGTCGGGCGGGACGGCCGAGATATCGTCTGGAGCCTTTTCGATCATCAAAATGCGGCCCGCCAAG
ATGCGCAACTGCTGCTAGACAAGGAAGCGGGGCCTTCTGGACGGCTGCGCGTGGCGACACCGCCGCAGTCGTCCATCACC
GAGTTTTTCGATGCCTGGCTTGATAAAGATGGTTTTCCGTTCTGGCCGTTCTGGGAAAATCTACGGTCGTGGTGGTTGGC
GCGGATTGTCCCGAATGTCCTGTTTGTGCATTATGCCGACCTGATCACGGATATGGCCGAACAAATCCTTCGGATCGCTG
CCTTTTTAGAGGTCCCATTGTCGCTTGATCGGCTACCGCGCATTTTGCACAACTGTAGCCTCGGACATATGAGGGACCAT
GCCCGTCGCTATGTTCCGCATGGAGCAGGCCTGTGGAAAGACGATGGCAAGTTGTTTTTTAACAAGGGGCAAAACGGGCG
ATGGATCGATATACTGACGCCGGAGGCTAATGCAAAGTTTGAACAGCATGCCATGGCAGAACTTGGCGTCGATTGCGCCA
AATGGATGATGTCTGGACGTGCGGGTCTAAAGCATGTCGCGTTTCATTGCCCTCAATGA

Upstream 100 bases:

>100_bases
GCCTGAACAAAAGCCAGAAGAGCTTGAAGACAATACGCGCGATTACCTGGACGGCTTACATCAAACGACATTTCGTTAAG
ACGTGGTTTCGGAGGACGTC

Downstream 100 bases:

>100_bases
AACGATAACGTACATGCGACAAAATAAGAGCTAAAGCGAGCTAAGATCTTGTTTTTTGAACTTACGCATTCAAAACCACC
AGAAGCAGTTGGCGGACGCG

Product: sulfotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MDANDHLLKKREFANRYFDASIWNDIKYRDGDIVVASYAKAGTTLVQQIIAQLIFDQDDEVDVAAISPWIDSVYPDKKVK
LDLIEAQTHRRFLKTHLPMDALIFSEKAKYIYVGRDGRDIVWSLFDHQNAARQDAQLLLDKEAGPSGRLRVATPPQSSIT
EFFDAWLDKDGFPFWPFWENLRSWWLARIVPNVLFVHYADLITDMAEQILRIAAFLEVPLSLDRLPRILHNCSLGHMRDH
ARRYVPHGAGLWKDDGKLFFNKGQNGRWIDILTPEANAKFEQHAMAELGVDCAKWMMSGRAGLKHVAFHCPQ

Sequences:

>Translated_312_residues
MDANDHLLKKREFANRYFDASIWNDIKYRDGDIVVASYAKAGTTLVQQIIAQLIFDQDDEVDVAAISPWIDSVYPDKKVK
LDLIEAQTHRRFLKTHLPMDALIFSEKAKYIYVGRDGRDIVWSLFDHQNAARQDAQLLLDKEAGPSGRLRVATPPQSSIT
EFFDAWLDKDGFPFWPFWENLRSWWLARIVPNVLFVHYADLITDMAEQILRIAAFLEVPLSLDRLPRILHNCSLGHMRDH
ARRYVPHGAGLWKDDGKLFFNKGQNGRWIDILTPEANAKFEQHAMAELGVDCAKWMMSGRAGLKHVAFHCPQ
>Mature_312_residues
MDANDHLLKKREFANRYFDASIWNDIKYRDGDIVVASYAKAGTTLVQQIIAQLIFDQDDEVDVAAISPWIDSVYPDKKVK
LDLIEAQTHRRFLKTHLPMDALIFSEKAKYIYVGRDGRDIVWSLFDHQNAARQDAQLLLDKEAGPSGRLRVATPPQSSIT
EFFDAWLDKDGFPFWPFWENLRSWWLARIVPNVLFVHYADLITDMAEQILRIAAFLEVPLSLDRLPRILHNCSLGHMRDH
ARRYVPHGAGLWKDDGKLFFNKGQNGRWIDILTPEANAKFEQHAMAELGVDCAKWMMSGRAGLKHVAFHCPQ

Specific function: Involved in the synthesis of cell wall sulfolipids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfotransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI29550928, Length=285, Percent_Identity=27.3684210526316, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI4885617, Length=275, Percent_Identity=23.6363636363636, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI31563388, Length=263, Percent_Identity=25.0950570342205, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI31563386, Length=263, Percent_Identity=25.4752851711027, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI28830308, Length=270, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI56847626, Length=264, Percent_Identity=23.1060606060606, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI4507305, Length=262, Percent_Identity=23.2824427480916, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI29540545, Length=274, Percent_Identity=23.3576642335766, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221468277, Length=276, Percent_Identity=25.3623188405797, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000863 [H]

Pfam domain/function: PF00685 Sulfotransfer_1 [H]

EC number: NA

Molecular weight: Translated: 35931; Mature: 35931

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDANDHLLKKREFANRYFDASIWNDIKYRDGDIVVASYAKAGTTLVQQIIAQLIFDQDDE
CCCCHHHHHHHHHHHHHCCHHHHCCCEECCCCEEEEECHHHHHHHHHHHHHHHHCCCCCC
VDVAAISPWIDSVYPDKKVKLDLIEAQTHRRFLKTHLPMDALIFSEKAKYIYVGRDGRDI
CCCEEECHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHH
VWSLFDHQNAARQDAQLLLDKEAGPSGRLRVATPPQSSITEFFDAWLDKDGFPFWPFWEN
HHHHHHCCCHHHHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHH
LRSWWLARIVPNVLFVHYADLITDMAEQILRIAAFLEVPLSLDRLPRILHNCSLGHMRDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH
ARRYVPHGAGLWKDDGKLFFNKGQNGRWIDILTPEANAKFEQHAMAELGVDCAKWMMSGR
HHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHCCC
AGLKHVAFHCPQ
CCHHHHHEECCC
>Mature Secondary Structure
MDANDHLLKKREFANRYFDASIWNDIKYRDGDIVVASYAKAGTTLVQQIIAQLIFDQDDE
CCCCHHHHHHHHHHHHHCCHHHHCCCEECCCCEEEEECHHHHHHHHHHHHHHHHCCCCCC
VDVAAISPWIDSVYPDKKVKLDLIEAQTHRRFLKTHLPMDALIFSEKAKYIYVGRDGRDI
CCCEEECHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCHH
VWSLFDHQNAARQDAQLLLDKEAGPSGRLRVATPPQSSITEFFDAWLDKDGFPFWPFWEN
HHHHHHCCCHHHHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHH
LRSWWLARIVPNVLFVHYADLITDMAEQILRIAAFLEVPLSLDRLPRILHNCSLGHMRDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH
ARRYVPHGAGLWKDDGKLFFNKGQNGRWIDILTPEANAKFEQHAMAELGVDCAKWMMSGR
HHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHCCC
AGLKHVAFHCPQ
CCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA