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The map label for this gene is frr [H]

Identifier: 222097269

GI number: 222097269

Start: 3571742

End: 3572146

Strand: Reverse

Name: frr [H]

Synonym: BCQ_3609

Alternate gene names: 222097269

Gene position: 3572146-3571742 (Counterclockwise)

Preceding gene: 222097270

Following gene: 222097268

Centisome position: 68.51

GC content: 35.06

Gene sequence:

>405_bases
GTGCAATTAGCGAACATTACAGTTCCAGAAGCACGTTTACTTGTAATTCAACCGTATGATAAAACTTCTATCGGTGATAT
CGAAAAAGCAATTTTAAAAGCAGATTTAGGATTAAACCCTTCTAATGATGGAACTGTAATTCGTATTGCATTCCCTGCAT
TAACAGAAGAGCGTCGTCGTGATCTTGTAAAAGTTGTGAAAAAATATGCTGAAGAAGCAAAAGTTGCTGTTCGTAACGTA
CGTCGTGACGGTAACGATGATCTTAAGAAGCTTGAAAAAGCTGGCGAGATTACAGAAGACGATTTAAGAGGATATACTGA
AGATATCCAAAAAGAAACAGATAAATATATTGCAAAAGTTGACGAAATCGCAAAAAACAAAGAAAAAGAAATCATGGAAG
TGTAA

Upstream 100 bases:

>100_bases
TGCTTATTCACGCGAATTAGCAACAGTTCGCGCTGGTCGTGCAAACGCGTCTGTATTAGATAAAGTACAAGTTGATTACT
ATGGTGCACCAACACCAGTT

Downstream 100 bases:

>100_bases
TAGCGATACTTTCGCAAATATGACCCTCTTCTTAAGGGGGTCTTTTTACACTTTTAGGCATACGTCTGCTTGTTGGAGGG
TATGAATGATGTTTAAAAAC

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNV
RRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV

Sequences:

>Translated_134_residues
MQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNV
RRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV
>Mature_134_residues
MQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNV
RRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Escherichia coli, GI1786368, Length=132, Percent_Identity=50.7575757575758, Blast_Score=129, Evalue=8e-32,
Organism=Drosophila melanogaster, GI24661488, Length=110, Percent_Identity=32.7272727272727, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 15198; Mature: 15198

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRR
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH
DLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DEIAKNKEKEIMEV
HHHHHCHHHHHHCC
>Mature Secondary Structure
MQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRR
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH
DLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DEIAKNKEKEIMEV
HHHHHCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA