BacMap

Definition	Bacillus cereus Q1 chromosome, complete genome.
Accession	NC_011969
Length	5,214,195

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The map label for this gene is yfnA [H]

Identifier: 222096608

GI number: 222096608

Start: 2879340

End: 2880755

Strand: Reverse

Name: yfnA [H]

Synonym: BCQ_2948

Alternate gene names: 222096608

Gene position: 2880755-2879340 (Counterclockwise)

Preceding gene: 222096609

Following gene: 222096607

Centisome position: 55.25

GC content: 35.73

Gene sequence:

>1416_bases
ATGAGTAATTTACTAAAAAAGAAATCCGTTACACAATTGTTAGCGCATAATCAAAGCAAGACTTTAACGAAAACATTAGG
AGCATTTGATTTAATTATGTTAGGAGTAGGCTCGATAGTTGGAACAGGTGTTCTTGTCTTAACTGGATTAGTAGCAGCAA
GAGATGCTGGTCCAGCAGTTATTTTTTCATTTGTACTTGCAGCAATTATATGCGGATTTATAGCATTATGTTACGCAGAA
ATTGCTTCTACACTCCCGGCGTCTGGTAGTGTATATACGTACTCATATGCAACAATTGGTGAGTTTGTTGCTCATCTAGT
AGGTTGGTCATTGCTGTTAATATATATCGTGGCAACAGCAGCTGTCGCTGCTGGATGGACAGGCTATTTCCACAATTTAA
TAAAGGGATTTGGATTAGAGATACCTAAAGCTCTAGTAACGATTCCTTCGCATGGTGGTATTGTGAATCTACCAGCAGTA
ATTATTACATTGATATTGGCATGGATGTTATCTCGTGGTACGAAGGAAAGTAAACGAATCAATAATATAATGGTATTGAT
TAAAATTGGAATGATTTTGTTGTTTATTACGGTTGGTATATTCTATGTAAAACCAATGAACTGGATACCAATTGCACCAT
ACGGTTTAAGTGGAGTTTTTACGGGTGGAGCAGCTATTTTATTCGCTTTTACGGGTTTTGATATATTAGCAACTTCAGCA
GAAGAAGTAAAAGATCCGAAACGTAATCTTCCTATCGGTATTATTGCATCATTAATCATATGTACAATTATTTATATTAT
GGTATGCCTTGTTATGACAGGAATGGTTTCCTATAAAGAATTAAATGTTCCTGAGGCAATGGCTTATGTAATGGAAGTGG
TAGGACAAGGAAAAGTCGCTGGTGCAATTGCTGCAGGTGCTGTAATTGGCCTTATGGCAGTTATTTTTTCGAATATGTAT
GCGGCAACACGAGTATTCTTTGCAATGAGTCGTGATGGATTGTTACCGAAATCATTTGCGAAAGTTAATAAGAAAACTGG
AGCACCCACTTTTGTAACTGGATTGGCAGGAATAGGGAGTTCTATAATAGCTGGGTTTATTGATTTGAAAGAATTGGTTA
ATTTAGTTAATATCGGTAGTTTGGTGACGTTTGCGTTAGTTTGTCTATCAGTTATTATGCTACGTAAATCACACCCAAAT
TTAAAACGTGGATTTATGGTACCTTTTGTACCTGTATTACCATGCGTTGCAATTGTATGCTGTGTGTTTTTAATGCTAAA
TTTACCGTTAAGGACATGGGTGTACTTTAGTATTTGGATTACTATTGGGGTAGTAGTATATTTCCTTTATTCGATAAAAC
ACAGTAATTTAAATGAGGAAACGATCTCGAAATTACATGATAAAATTGCGAGATAA

Upstream 100 bases:

>100_bases
AATGTAAAAGAAATATTATGAGGCTAGTTAATAACTAAGTAAATTTATATACAACACTAACGAGACGAACAAACCTTATT
TTAAAGGGGATACAGAAAAT

Downstream 100 bases:

>100_bases
TAACGATCGAAAATTTTATTAATAATCATATTGATAGTTGAGTAAAATAGAACCAGTTTTTTGATATTTAGCAAGAACTA
AAATGAAAAATCTTAGGACA

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MSNLLKKKSVTQLLAHNQSKTLTKTLGAFDLIMLGVGSIVGTGVLVLTGLVAARDAGPAVIFSFVLAAIICGFIALCYAE
IASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATAAVAAGWTGYFHNLIKGFGLEIPKALVTIPSHGGIVNLPAV
IITLILAWMLSRGTKESKRINNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSA
EEVKDPKRNLPIGIIASLIICTIIYIMVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVAGAIAAGAVIGLMAVIFSNMY
AATRVFFAMSRDGLLPKSFAKVNKKTGAPTFVTGLAGIGSSIIAGFIDLKELVNLVNIGSLVTFALVCLSVIMLRKSHPN
LKRGFMVPFVPVLPCVAIVCCVFLMLNLPLRTWVYFSIWITIGVVVYFLYSIKHSNLNEETISKLHDKIAR

Sequences:

>Translated_471_residues
MSNLLKKKSVTQLLAHNQSKTLTKTLGAFDLIMLGVGSIVGTGVLVLTGLVAARDAGPAVIFSFVLAAIICGFIALCYAE
IASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATAAVAAGWTGYFHNLIKGFGLEIPKALVTIPSHGGIVNLPAV
IITLILAWMLSRGTKESKRINNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSA
EEVKDPKRNLPIGIIASLIICTIIYIMVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVAGAIAAGAVIGLMAVIFSNMY
AATRVFFAMSRDGLLPKSFAKVNKKTGAPTFVTGLAGIGSSIIAGFIDLKELVNLVNIGSLVTFALVCLSVIMLRKSHPN
LKRGFMVPFVPVLPCVAIVCCVFLMLNLPLRTWVYFSIWITIGVVVYFLYSIKHSNLNEETISKLHDKIAR
>Mature_470_residues
SNLLKKKSVTQLLAHNQSKTLTKTLGAFDLIMLGVGSIVGTGVLVLTGLVAARDAGPAVIFSFVLAAIICGFIALCYAEI
ASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATAAVAAGWTGYFHNLIKGFGLEIPKALVTIPSHGGIVNLPAVI
ITLILAWMLSRGTKESKRINNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSAE
EVKDPKRNLPIGIIASLIICTIIYIMVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVAGAIAAGAVIGLMAVIFSNMYA
ATRVFFAMSRDGLLPKSFAKVNKKTGAPTFVTGLAGIGSSIIAGFIDLKELVNLVNIGSLVTFALVCLSVIMLRKSHPNL
KRGFMVPFVPVLPCVAIVCCVFLMLNLPLRTWVYFSIWITIGVVVYFLYSIKHSNLNEETISKLHDKIAR

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=433, Percent_Identity=36.7205542725173, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI258645169, Length=425, Percent_Identity=35.2941176470588, Blast_Score=238, Evalue=7e-63,
Organism=Homo sapiens, GI258614005, Length=425, Percent_Identity=34.8235294117647, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI258614003, Length=425, Percent_Identity=34.8235294117647, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI181337167, Length=428, Percent_Identity=33.1775700934579, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI110347453, Length=404, Percent_Identity=35.3960396039604, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI114326544, Length=427, Percent_Identity=30.6791569086651, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI114326550, Length=427, Percent_Identity=30.6791569086651, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI7657683, Length=426, Percent_Identity=26.056338028169, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI186910308, Length=421, Percent_Identity=23.5154394299287, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI186910306, Length=421, Percent_Identity=23.5154394299287, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI186910304, Length=421, Percent_Identity=23.5154394299287, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI115648063, Length=431, Percent_Identity=23.8979118329466, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI115648022, Length=431, Percent_Identity=23.8979118329466, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI33286428, Length=451, Percent_Identity=25.7206208425721, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI187423910, Length=486, Percent_Identity=25.1028806584362, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI7657591, Length=486, Percent_Identity=25.1028806584362, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI71979932, Length=227, Percent_Identity=26.8722466960352, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI9790235, Length=302, Percent_Identity=23.5099337748344, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI87082023, Length=454, Percent_Identity=28.8546255506608, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI87081708, Length=485, Percent_Identity=22.0618556701031, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788480, Length=458, Percent_Identity=22.2707423580786, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87081869, Length=406, Percent_Identity=25.1231527093596, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1790653, Length=359, Percent_Identity=23.9554317548747, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI2367353, Length=464, Percent_Identity=22.8448275862069, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1786694, Length=335, Percent_Identity=25.6716417910448, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1786302, Length=348, Percent_Identity=22.7011494252874, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082250, Length=467, Percent_Identity=25.0535331905782, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789017, Length=360, Percent_Identity=23.0555555555556, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786908, Length=338, Percent_Identity=24.8520710059172, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=424, Percent_Identity=33.4905660377358, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI17531343, Length=409, Percent_Identity=33.7408312958435, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17533459, Length=412, Percent_Identity=31.0679611650485, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71982612, Length=374, Percent_Identity=23.7967914438503, Blast_Score=98, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI71982608, Length=374, Percent_Identity=23.7967914438503, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17568033, Length=422, Percent_Identity=22.0379146919431, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32566699, Length=344, Percent_Identity=27.0348837209302, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193208714, Length=426, Percent_Identity=24.6478873239437, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32566695, Length=426, Percent_Identity=24.6478873239437, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17540018, Length=205, Percent_Identity=27.8048780487805, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17537453, Length=384, Percent_Identity=23.6979166666667, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71993915, Length=395, Percent_Identity=23.0379746835443, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71995382, Length=395, Percent_Identity=22.5316455696203, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71995388, Length=395, Percent_Identity=22.5316455696203, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71982623, Length=244, Percent_Identity=25.4098360655738, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6319543, Length=364, Percent_Identity=23.6263736263736, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666159, Length=422, Percent_Identity=36.2559241706161, Blast_Score=261, Evalue=6e-70,
Organism=Drosophila melanogaster, GI221512776, Length=422, Percent_Identity=36.2559241706161, Blast_Score=261, Evalue=9e-70,
Organism=Drosophila melanogaster, GI24668806, Length=423, Percent_Identity=36.1702127659575, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI21356285, Length=423, Percent_Identity=36.1702127659575, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24668802, Length=423, Percent_Identity=36.1702127659575, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24667468, Length=406, Percent_Identity=34.9753694581281, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI161077963, Length=403, Percent_Identity=35.4838709677419, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI281366235, Length=413, Percent_Identity=32.6876513317191, Blast_Score=202, Evalue=6e-52,
Organism=Drosophila melanogaster, GI116007820, Length=413, Percent_Identity=32.6876513317191, Blast_Score=202, Evalue=6e-52,
Organism=Drosophila melanogaster, GI116007818, Length=415, Percent_Identity=32.7710843373494, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI85725152, Length=415, Percent_Identity=32.7710843373494, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI21357367, Length=453, Percent_Identity=24.2825607064018, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24651635, Length=398, Percent_Identity=24.3718592964824, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24651633, Length=398, Percent_Identity=24.3718592964824, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI221331183, Length=419, Percent_Identity=26.0143198090692, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647653, Length=419, Percent_Identity=26.0143198090692, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24664379, Length=419, Percent_Identity=26.0143198090692, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45550968, Length=436, Percent_Identity=26.1467889908257, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI19921172, Length=436, Percent_Identity=26.1467889908257, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24641995, Length=423, Percent_Identity=23.8770685579196, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641993, Length=423, Percent_Identity=23.8770685579196, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50474; Mature: 50342

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SNLLKKKSVTQLLAHNQSKTLTKTLGAFDLIMLGVGSIVGTGVLVLTGLVAARDAGPAV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IFSFVLAAIICGFIALCYAEIASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAAGWTGYFHNLIKGFGLEIPKALVTIPSHGGIVNLPAVIITLILAWMLSRGTKESKRI
HHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHH
NNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCH
EEVKDPKRNLPIGIIASLIICTIIYIMVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVA
HHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
GAIAAGAVIGLMAVIFSNMYAATRVFFAMSRDGLLPKSFAKVNKKTGAPTFVTGLAGIGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
SIIAGFIDLKELVNLVNIGSLVTFALVCLSVIMLRKSHPNLKRGFMVPFVPVLPCVAIVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
CVFLMLNLPLRTWVYFSIWITIGVVVYFLYSIKHSNLNEETISKLHDKIAR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]