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The map label for this gene is des [H]

Identifier: 222096476

GI number: 222096476

Start: 2754534

End: 2755565

Strand: Reverse

Name: des [H]

Synonym: BCQ_2816

Alternate gene names: 222096476

Gene position: 2755565-2754534 (Counterclockwise)

Preceding gene: 222096477

Following gene: 222096475

Centisome position: 52.85

GC content: 34.11

Gene sequence:

>1032_bases
ATGACATTAGAAAATACTAAAAATTTAAAAAAACAAGTTGCTCCATATGAAAAATCAACAATTAAAAAAAGTGTGTGGCA
ACTTATTAACACAGTCGTGCCATTTGTTGTTTTATGGTATCTCGCTTATAAAAGTTTGTCTGTTTCTTATCTGTTAGCAT
TAGTTCCATCTTTGTTAGCTGCTGGTTTTATGACGCGAATTTTCATAATTTTTCATGATTGTACCCATTATTCATTCTTT
AAAAGTCGACGTGCAAATAGAATAGTAGGTACATGTATGGGTGTGTTAACGTTATTCCCATTTGATCAATGGGGGCATGA
GCATGCGATTCATCACGCTACAAGTGGTAATTTAGATAAGCGAGGTACAGGAGATATTTGGACGCTTACAGTCGATGAAT
ATGTAGCTGCACCATTTAGACTTCGTTTAGCATATCGTTTATATCGCAATCCATTCGTTATGTTTGGATTAGGTCCGATT
TATGTTTTCTTGCTTAAAAATAGATTTAACCGAAAAGGTGCAAGACAGAAAGAACGTATGAATACGTATTTGACGAATAT
TATTATCGTTGCTGTAGTAGCAATACTTTGCTGGGCAATAGGATGGCAATCGTTCCTATTAGTACATGGTACGATATTCT
TAATTGCAGGTTCAGTAGGGATTTGGCTGTTTTACGTACAGCACACATTCGAGGATTCTTACTTTGAAGAAGATAAAGAT
TGGGAATATGTGAAAGCGGCAGTAGAAGGAAGTTCATTTTATAAACTTCCAAAAATCTTGCAATTCTTAACTGGTAATAT
TGGATTTCATCATGTTCACCATTTAAGTCCAAGAGTACCTAACTATAAACTAGAAGAGGCACACAATAATACGCTTCCGT
TAAAAAATGTACCAACAATTACACTTGCTACAAGCTTACGATCACTCCGTTTCCGTCTTTGGGATGAGAAAAGTAACAAT
TTTGTTAGCTTTAAAGATGTAAAAAATATAATTAAAAATAATGTTTCTGTTCGGGTGAAATCGGAATTATAA

Upstream 100 bases:

>100_bases
CACTGATTAAAGTTTCAATTTATTACATCTACTTTTAACACCTGATACTAATAGTATGCTATAATATGAATTAGCAACAA
AAAGGAAAGGAATTAGTAAA

Downstream 100 bases:

>100_bases
TTTCATCGGCTATAAAACTCCCCCTTAATCATTTTCGATTTAAGGGGAGTTTTTGTTATATATAACGGATATTGAGGACG
TGGAATACTCATATGTAGGT

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(5) acyl-lipid desaturase; Delta(5) desaturase [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTLENTKNLKKQVAPYEKSTIKKSVWQLINTVVPFVVLWYLAYKSLSVSYLLALVPSLLAAGFMTRIFIIFHDCTHYSFF
KSRRANRIVGTCMGVLTLFPFDQWGHEHAIHHATSGNLDKRGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPI
YVFLLKNRFNRKGARQKERMNTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKD
WEYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTITLATSLRSLRFRLWDEKSNN
FVSFKDVKNIIKNNVSVRVKSEL

Sequences:

>Translated_343_residues
MTLENTKNLKKQVAPYEKSTIKKSVWQLINTVVPFVVLWYLAYKSLSVSYLLALVPSLLAAGFMTRIFIIFHDCTHYSFF
KSRRANRIVGTCMGVLTLFPFDQWGHEHAIHHATSGNLDKRGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPI
YVFLLKNRFNRKGARQKERMNTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKD
WEYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTITLATSLRSLRFRLWDEKSNN
FVSFKDVKNIIKNNVSVRVKSEL
>Mature_342_residues
TLENTKNLKKQVAPYEKSTIKKSVWQLINTVVPFVVLWYLAYKSLSVSYLLALVPSLLAAGFMTRIFIIFHDCTHYSFFK
SRRANRIVGTCMGVLTLFPFDQWGHEHAIHHATSGNLDKRGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPIY
VFLLKNRFNRKGARQKERMNTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKDW
EYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTITLATSLRSLRFRLWDEKSNNF
VSFKDVKNIIKNNVSVRVKSEL

Specific function: Catalyzes the introduction of a cis-double bond at the delta(5) position of existing saturated fatty acids attached to membrane phospholipids. It is not strictly specific for palmitic acid (C16) but can also accept C14 as well as C18 species to yield unsa

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: 1.14.99.-

Molecular weight: Translated: 39705; Mature: 39574

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLENTKNLKKQVAPYEKSTIKKSVWQLINTVVPFVVLWYLAYKSLSVSYLLALVPSLLA
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFMTRIFIIFHDCTHYSFFKSRRANRIVGTCMGVLTLFPFDQWGHEHAIHHATSGNLDK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCCC
RGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPIYVFLLKNRFNRKGARQKERM
CCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHH
NTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC
WEYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTI
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCH
TLATSLRSLRFRLWDEKSNNFVSFKDVKNIIKNNVSVRVKSEL
HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
TLENTKNLKKQVAPYEKSTIKKSVWQLINTVVPFVVLWYLAYKSLSVSYLLALVPSLLA
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFMTRIFIIFHDCTHYSFFKSRRANRIVGTCMGVLTLFPFDQWGHEHAIHHATSGNLDK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCCC
RGTGDIWTLTVDEYVAAPFRLRLAYRLYRNPFVMFGLGPIYVFLLKNRFNRKGARQKERM
CCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHH
NTYLTNIIIVAVVAILCWAIGWQSFLLVHGTIFLIAGSVGIWLFYVQHTFEDSYFEEDKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC
WEYVKAAVEGSSFYKLPKILQFLTGNIGFHHVHHLSPRVPNYKLEEAHNNTLPLKNVPTI
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCH
TLATSLRSLRFRLWDEKSNNFVSFKDVKNIIKNNVSVRVKSEL
HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9555904; 9384377 [H]