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The map label for this gene is ymfD [H]

Identifier: 222095629

GI number: 222095629

Start: 1948259

End: 1949557

Strand: Direct

Name: ymfD [H]

Synonym: BCQ_1969

Alternate gene names: 222095629

Gene position: 1948259-1949557 (Clockwise)

Preceding gene: 222095628

Following gene: 222095631

Centisome position: 37.36

GC content: 36.8

Gene sequence:

>1299_bases
ATGAAAAGTTACGTTCCAGCAGGGCTATTATATGGTAAGAAATATATGATGAAAGGTTTCGAAGCCAACATGTTAAAAAA
AGAAAACTTTTGTTTGATTGCGCTTGCATCAGTTCCACTTGTTATGACATTAGGGAATTCAATGCTCATTCCAATTCTGC
CGACTATTGAAAAGAAATTACATATTTCATCGTTTCAAGTATCCATGATTATTACCATTTATTCTATCGTAGCCATTCTA
CTTATACCGATTGCTGGTTATTTATCAGATAGATGGGGACGAAAGATGGTAATGGTTCCGAGTTTGCTGATTGCGGCTAT
AGGAGGAGCGATAACTGGTTGGGTATCTTGGAAAGTTGATAATCCCTACACTTGGATATTGATCGGTAGAGCGATTCAAG
GTATTGGTGCTGCTGGTGCAATGCCAGTTGTTATACCGTGTGTTGGTGATTTATACAAAGATGAAAAACAAGTTAGTACA
GGTTTAGGAATCATCGAAACATCCAATACATTTGGGAAAGTGTTGAGCCCTATTTTAGGGTCTGCTCTGGCTGCCATTGT
ATGGTTCTTGCCGTTTTGGGCGATTCCAGTTTTATGCGTAGTATCAATTGTTTTATTACTTGTTCTAGTAAAGGCAAAGA
AACAAGAAGGAGAAGTACCACCGCTTAAAGAGTTTATAAAATCAATTCTTGCTACGTTTCGAGAAAAAGGAAGATGGTTA
ATTGCCATTTTTGCATTAGGTGCAATTATTATGCTTATTTTATTCGGAATTCTCTTTTATTTGTCAACTATATTGGAATC
AAAGTATGACATTCATGGTATTTGGAAAGGGTGTGTACTTGCAATCCCGTTACTTGTACTGTCACTTAGTTCATATATGG
CTGGCAAAAAAATTGGAGATAACCAAAATGTGATGAAGAAGTGTATTTACATTGGTTTTTTAATGGCTGCTGCATCAGTC
ATCATTCCTTTATTTATAAAAGGAATTTATTTACTACTTCTTTGTCTCGTTATTATGGGGGTAGGAATTGGTATGGCACT
CCCATGTTTAGATGCTCTCATTACACAAGGAATTGAAAAGGAGCAAAGGGGGACGGTTACGTCATTTTATAGTTCTATGC
GATTTATCGGTGTAGCAGCTGGACCACCTCTATACTCTTTTTTCATGAAAGGTGCTGACCATGAAGTGTTTTATGTAACA
AGTATTCTCGCTGGGATTGGTGCTGCTATAGCAATCATTTGGATTAAACCAGCAAAAGATGCAAAGAACGTAAAAAAGAA
ACCAGAACCTACTTCATAA

Upstream 100 bases:

>100_bases
ATATTGTGAACTGGATTCAAAGAATAGGAATAATACTATATTTTCCCCAATTTCTTTTGTTGTGAATGGGAAGTAGTAAA
AATGTAATAGCCCTGGTGGA

Downstream 100 bases:

>100_bases
TTTGTAAGAGAATTGCATGATGTTTTCAGTAACATGCAATTCTCTTTCGTTCATTAGGAATAAATAACTTGTTTTAACAT
ATAAAGTGCGACACTCCATA

Product: multidrug ABC transporter permease

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKSYVPAGLLYGKKYMMKGFEANMLKKENFCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEVPPLKEFIKSILATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV
IIPLFIKGIYLLLLCLVIMGVGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYVT
SILAGIGAAIAIIWIKPAKDAKNVKKKPEPTS

Sequences:

>Translated_432_residues
MKSYVPAGLLYGKKYMMKGFEANMLKKENFCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEVPPLKEFIKSILATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV
IIPLFIKGIYLLLLCLVIMGVGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYVT
SILAGIGAAIAIIWIKPAKDAKNVKKKPEPTS
>Mature_432_residues
MKSYVPAGLLYGKKYMMKGFEANMLKKENFCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL
LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST
GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEVPPLKEFIKSILATFREKGRWL
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV
IIPLFIKGIYLLLLCLVIMGVGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYVT
SILAGIGAAIAIIWIKPAKDAKNVKKKPEPTS

Specific function: Involved in secretion of bacillibactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46957; Mature: 46957

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYVPAGLLYGKKYMMKGFEANMLKKENFCLIALASVPLVMTLGNSMLIPILPTIEKKL
CCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEECHHHHHHHH
HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHEEEEEEEEC
NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG
CCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
SALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEVPPLKEFIKSILATFREKGRWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQNVMKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGVGIGMALPCLDALITQGIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYVTSILAGIGAAIAIIWIKPAKD
HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCC
AKNVKKKPEPTS
HHHCCCCCCCCC
>Mature Secondary Structure
MKSYVPAGLLYGKKYMMKGFEANMLKKENFCLIALASVPLVMTLGNSMLIPILPTIEKKL
CCCCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEECHHHHHHHH
HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHEEEEEEEEC
NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG
CCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH
SALAAIVWFLPFWAIPVLCVVSIVLLLVLVKAKKQEGEVPPLKEFIKSILATFREKGRWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE
IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQNVMKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGVGIGMALPCLDALITQGIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGADHEVFYVTSILAGIGAAIAIIWIKPAKD
HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEECCCC
AKNVKKKPEPTS
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]