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The map label for this gene is lstR

Identifier: 222094770

GI number: 222094770

Start: 1095216

End: 1095623

Strand: Direct

Name: lstR

Synonym: BCQ_1108

Alternate gene names: NA

Gene position: 1095216-1095623 (Clockwise)

Preceding gene: 222094769

Following gene: 222094771

Centisome position: 21.0

GC content: 37.01

Gene sequence:

>408_bases
ATGGAAGATCGATTAAAAGGCTTACGAAAATCAATGGAGAACACAACTTTTAAACATTTGAGTTTTTCTGATCAGCACCA
GAAGCGGGTGCATAAAAAAATCAATCAATCGTCCGAAAAAGAAGAAGATATCCTTTTAGCAGTGTTGCAACTTCTTATGA
ATGAAAAAACAGGCTATGAATTGATGCAGTTACTGCGGGGGAGAGGAATTCAAACATTCGAAGGTGATGAAGGATCTCTA
TACACTTTATTACATCGTCTAGAGCAGAATCGCTTTATCCAATCTAGCTGGGACCACGCGGAAGCTAAATATTATCAATT
GAATGATAAAGGAAATAAAATGCTGCGAAAGGTAGAGAAGAATGCTACGAAGGCACGATTTATATTAAAAGGATTAGTAC
AGGAGTGA

Upstream 100 bases:

>100_bases
AAAGAGGTTGCTATTGTAATAGAAGTGAAGGAGAACACGATAAAAACGAGACTGAAAAAAGCAAAGGAGCTTTTGAAGAA
AGGATTGGAGGAATAGTCAA

Downstream 100 bases:

>100_bases
GAACAAATTGAACAAAAAAGGGGAGCGTTTTTTAAAAGAAGTTACGAACCATATTAAATCAAAAGAAGCAAAGGACTTAG
TGGCAACGGAACTAGACTTT

Product: lineage-specific thermal regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator PadR Family; PadR Family Transcriptional Regulator

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVHKKINQSSEKEEDILLAVLQLLMNEKTGYELMQLLRGRGIQTFEGDEGSL
YTLLHRLEQNRFIQSSWDHAEAKYYQLNDKGNKMLRKVEKNATKARFILKGLVQE

Sequences:

>Translated_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVHKKINQSSEKEEDILLAVLQLLMNEKTGYELMQLLRGRGIQTFEGDEGSL
YTLLHRLEQNRFIQSSWDHAEAKYYQLNDKGNKMLRKVEKNATKARFILKGLVQE
>Mature_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVHKKINQSSEKEEDILLAVLQLLMNEKTGYELMQLLRGRGIQTFEGDEGSL
YTLLHRLEQNRFIQSSWDHAEAKYYQLNDKGNKMLRKVEKNATKARFILKGLVQE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15940; Mature: 15940

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVHKKINQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHH
LMQLLRGRGIQTFEGDEGSLYTLLHRLEQNRFIQSSWDHAEAKYYQLNDKGNKMLRKVEK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVHKKINQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHH
LMQLLRGRGIQTFEGDEGSLYTLLHRLEQNRFIQSSWDHAEAKYYQLNDKGNKMLRKVEK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA