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The map label for this gene is nlpD [C]

Identifier: 222094477

GI number: 222094477

Start: 803897

End: 805057

Strand: Reverse

Name: nlpD [C]

Synonym: BCQ_0815

Alternate gene names: 222094477

Gene position: 805057-803897 (Counterclockwise)

Preceding gene: 222094495

Following gene: 222094474

Centisome position: 15.44

GC content: 35.75

Gene sequence:

>1161_bases
ATGAATATGAAAGCTACTGCTTTAACAGCAACTACTGTCGCAATTGCTTCTTTACTTCCTTCTATGGGAGAAACAAATGT
ACAAACAGCCAACGCTGAACAATTATCTAATGTGAAAACTGGATATGTCAAAGTCGATCAAGTAGCCTTACATACAAAAG
ATAACGCAAATAGCTCATCAATTGATACAATTCGCTTTAATACGAAAGTGAATATACTTGAAACAACTAATGGCTGGTAT
AAAGTATCTGTTAATAATAAAGTAGGTTACGTACAAAAAGATTCTATTCTACTAAAAAACAAACTTCAATCTAATAATCA
ATATATCGTCAATGCCAATGCATTAAACGTTCGTTCTGAACCTAATTTAGAATCTTCAATTTTAGATGTATTACCAAATG
GGAAATTCATTACTATTCAAGAAGAACAAGGTGAATGGTATAAAATTTTACATAATGGCAAAACAGGTTACGTACAAAAG
GCATTCGTATCTAATGGTTCACAGCCTTTAGTAAAAGGCATCACAGTTCAAAATAATACGAAATACACAGTTGCAACACC
TAAACTTAATGTGCGTAGCAACGCTAGTACAAGTAGCGCACTACTTGGTTCATTACAAAATGGTACACAATTACAAGTAG
TGGAAACTGTAGGAACTTGGTATAAAATTCGTTTTGGCACAGGATACGGATATGTGGCAAAGCATTATGTAGTGCAAAAT
CAAACGCAATCACAAGCTCAAACGACTCAACCTACTTCCATTCCAGCCGTTTTCAAATTCCCTACTCAAGGAAAAATTAG
CTCAACATTTGATATGCGCTGGGAACAAATGCATTATGGTATAGATATCGCAGCTCAGGGTAATGTCTCTATCCAGGCTG
CTGCGGCAGGTAAAGTCGTGAAATCATATTATTCAGCTAGCTATGGCAATGTTGTGTTCATCGCCCATCAAATAAACGGG
AAATTATATACAACAGTCTATGCTCACATGAAAGATCGCACTGTACAAGCTGGTGATCAAGTACAAGCTGGACAATTAGT
AGGTCATATGGGAAACACAGGTCATTCATACGGGCAACATCTTCATTTTGAATTACACAATGGAGAATGGAATTTTGAAA
AAACAAATGCAGTAAACCCACTGCCATATTTAGTTAGGTAA

Upstream 100 bases:

>100_bases
ATATTGATTTCATATTACATTTATGTGAATACACCCACTATATTATATCTTTATACTATAATAAAATTACAACTATACAA
CTAGAGGAGGTCTCTATTAT

Downstream 100 bases:

>100_bases
ATTGTATGCCACGCAATATCAATATACCTCTCTTAATTGAATACTTAGCCTTTTTAGGCCTAATCTGTTGCTTAGTAATT
TATAATACAAATACTGTATT

Product: peptidase, nlp/p60 family sh3 domain protein and m23/m37 family peptidase fusion

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFITIQEEQGEWYKILHNGKTGYVQK
AFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQAQTTQPTSIPAVFKFPTQGKISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Sequences:

>Translated_386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFITIQEEQGEWYKILHNGKTGYVQK
AFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQAQTTQPTSIPAVFKFPTQGKISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR
>Mature_386_residues
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSSIDTIRFNTKVNILETTNGWY
KVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSEPNLESSILDVLPNGKFITIQEEQGEWYKILHNGKTGYVQK
AFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
QTQSQAQTTQPTSIPAVFKFPTQGKISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVVKSYYSASYGNVVFIAHQING
KLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQHLHFELHNGEWNFEKTNAVNPLPYLVR

Specific function: May Be Involved In Stationary-Phase Survival. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI1789099, Length=128, Percent_Identity=37.5, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081989, Length=133, Percent_Identity=35.3383458646617, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 42419; Mature: 42419

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSS
CCCCEEEHHHHHHHHHHHHCCCCCCCCEECCHHHHHCCCCCEEEEEEEEEEECCCCCCCC
IDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEECCCCCEEECCCEEEEHHHCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFITIQEEQGEWYKILHNGKTGYVQKAFVSNGSQPLVKGITVQNNT
CCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEEEECCC
KYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCHHEEEEEEEC
QTQSQAQTTQPTSIPAVFKFPTQGKISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVV
CCHHHHHCCCCCCCCEEEECCCCCCCCCCHHCCEEEEECCEEEEECCCEEEEEHHHHHHH
KSYYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQH
HHHHCCCCCCEEEEEEECCCEEEEEEEEECCCCEECCCCCEEHHHHEECCCCCCCCCCCE
LHFELHNGEWNFEKTNAVNPLPYLVR
EEEEEECCEECEECCCCCCCCCHHCC
>Mature Secondary Structure
MNMKATALTATTVAIASLLPSMGETNVQTANAEQLSNVKTGYVKVDQVALHTKDNANSSS
CCCCEEEHHHHHHHHHHHHCCCCCCCCEECCHHHHHCCCCCEEEEEEEEEEECCCCCCCC
IDTIRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKLQSNNQYIVNANALNVRSE
EEEEEECCEEEEEEECCCEEEEEECCCCCEEECCCEEEEHHHCCCCCEEEEECEEEECCC
PNLESSILDVLPNGKFITIQEEQGEWYKILHNGKTGYVQKAFVSNGSQPLVKGITVQNNT
CCHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEEEECCC
KYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGTWYKIRFGTGYGYVAKHYVVQN
EEEEECCEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCHHEEEEEEEC
QTQSQAQTTQPTSIPAVFKFPTQGKISSTFDMRWEQMHYGIDIAAQGNVSIQAAAAGKVV
CCHHHHHCCCCCCCCEEEECCCCCCCCCCHHCCEEEEECCEEEEECCCEEEEEHHHHHHH
KSYYSASYGNVVFIAHQINGKLYTTVYAHMKDRTVQAGDQVQAGQLVGHMGNTGHSYGQH
HHHHCCCCCCEEEEEEECCCEEEEEEEEECCCCEECCCCCEEHHHHEECCCCCCCCCCCE
LHFELHNGEWNFEKTNAVNPLPYLVR
EEEEEECCEECEECCCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]