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The map label for this gene is yizB [H]

Identifier: 222094157

GI number: 222094157

Start: 448981

End: 449310

Strand: Direct

Name: yizB [H]

Synonym: BCQ_0450

Alternate gene names: 222094157

Gene position: 448981-449310 (Clockwise)

Preceding gene: 222094156

Following gene: 222094161

Centisome position: 8.61

GC content: 31.52

Gene sequence:

>330_bases
ATGAAAAAATCAACACAAATGTTAAAAGGTGTTTTAGATGGATGTATTTTATCCATTATTCAAGAAGGGGAAATATACGG
TTACGAATTAAAGGAAAAATTACATAACTATGGCTTTCACTCTTTTAGTGAAGGGACGATATATCCATTATTATTACGTA
TGCAAAAAGAAGGATTAGTTACGAGTGTATTAAGGGAATCTACGACTGGTCCAAAAAGAAAGTACTATGCGTTATCAAAA
ATGGGGGAAAAGGAATTGGATAAATTCAAAGAGCGTTGGGACGATTTAAAATTATTTGTTGAAAATGTAATTAATAAGGA
GGGGAAGTAG

Upstream 100 bases:

>100_bases
TTACGTTCATTATACCTTGCATTACAAGTTATCGTATGTTATTTTTATGTTTATGTTTAAAGCACTTGTATTAAAAGTTA
ACAGGAGAGAGGGGAATGAA

Downstream 100 bases:

>100_bases
AATTATATGCAAGAAGTCTGCTCAATTTTTAATCGAACTTAGAATGCTGTTATTGTAACAAAGAGTCACCATATCAAAAA
AGAAAATTATACGTTTCGAA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKKSTQMLKGVLDGCILSIIQEGEIYGYELKEKLHNYGFHSFSEGTIYPLLLRMQKEGLVTSVLRESTTGPKRKYYALSK
MGEKELDKFKERWDDLKLFVENVINKEGK

Sequences:

>Translated_109_residues
MKKSTQMLKGVLDGCILSIIQEGEIYGYELKEKLHNYGFHSFSEGTIYPLLLRMQKEGLVTSVLRESTTGPKRKYYALSK
MGEKELDKFKERWDDLKLFVENVINKEGK
>Mature_109_residues
MKKSTQMLKGVLDGCILSIIQEGEIYGYELKEKLHNYGFHSFSEGTIYPLLLRMQKEGLVTSVLRESTTGPKRKYYALSK
MGEKELDKFKERWDDLKLFVENVINKEGK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12668; Mature: 12668

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSTQMLKGVLDGCILSIIQEGEIYGYELKEKLHNYGFHSFSEGTIYPLLLRMQKEGLV
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TSVLRESTTGPKRKYYALSKMGEKELDKFKERWDDLKLFVENVINKEGK
HHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKSTQMLKGVLDGCILSIIQEGEIYGYELKEKLHNYGFHSFSEGTIYPLLLRMQKEGLV
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TSVLRESTTGPKRKYYALSKMGEKELDKFKERWDDLKLFVENVINKEGK
HHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]