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The map label for this gene is oppC [H]

Identifier: 222093953

GI number: 222093953

Start: 187091

End: 188095

Strand: Direct

Name: oppC [H]

Synonym: BCQ_0209

Alternate gene names: 222093953

Gene position: 187091-188095 (Clockwise)

Preceding gene: 222093952

Following gene: 222093954

Centisome position: 3.59

GC content: 37.31

Gene sequence:

>1005_bases
ATGGGTGCTTATGAAATTAATAAACAGTTATTGACAAATGAAGAGAAAAAAGAATTAACGAGAAATAAAGATCAGCAAGC
AATTAGCAGAAAAAAAGAAGTGTTTCGTAAGTTTGTATCGAATCCAATCGCAGTTCTAGGAACGGTGACATTGTTACTCA
TTATTATTTTTTCTCTTATCGGTGAAAGTTTAACCACTTTTACTGCGAGTGAACAAGTAAAAGAGGCGACAAATCTACCT
CCTAGTAGTGAGCATTGGTTTGGAACAGATGATTTAGGTAGAGATATTTGGGCGCGTACTTGGGCTGGTGGGAAAATTTC
GTTAGTAGTTGGATTAGTAGCAGCTGTTCTTGATATAGGACTTGGTGTACTAATTGGAGGATTTAGTGGATATGTGAGAG
GGCGTAATCGCCTTGGAACGTTAATAGATGAGTGGATTGTACGAGGGATTGAAATATTATACGGTATCCCATATTTATTA
ATTGTAATTTTATTGCTAATCATTATGAAACCAGGACTTTTTACAATTATTATCGCCCTTGCATTAACAGGTTGGATTGG
TATGGCACGTCTCGTTAGGGCGCAAGTCTTATCTTTAAAGCAAAGAGAATTTGTTATTGCAGCGGAACGATTAGGCACAT
CTCATATGAAGATTATATATGGACATATCATTCCGAACTTAACAGGTATTATTATCGTAAATTTATCATTTACAATTCCA
GCGGCTATTTTTTCAGAATCATTTTTAAGCTTCATCGGACTGGGAGTACAATCACCGGCGGCAAGCTGGGGGACAATGAC
GAATGATGCGCTTGGGACATTATTAAGTGGGGAATGGTGGCAACTTTTCTTCCCATCACTGATGATTGCGCTTATTATGT
TCGCATTTAATGCAATTGGTGATGGTTTGCAAGATGCAATTGATCCAAAAATCGTAAAACGGAATCGAAAGGAGAAAAAA
CATGGGACAGCTTTTATCTTTAGAAAACGTAACGTTAGCCGTTGA

Upstream 100 bases:

>100_bases
ATAGTGCATTATTAATTTTTTGTATTTTCATTACAGACATTATTCATCGTATTGTTGATCCGCGTATTCGTTCTATTACG
TAAGGAGGGAGGATATTTAA

Downstream 100 bases:

>100_bases
AAAAGAGAATAGTAAGCAAGAAATTGTGAAACATGTTTCCTTTTCTATTAACGAAGGTGAAATTGTTGCACTTGTAGGAG
AGAGTGGTTCAGGGAAAAGT

Product: oligopeptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGAYEINKQLLTNEEKKELTRNKDQQAISRKKEVFRKFVSNPIAVLGTVTLLLIIIFSLIGESLTTFTASEQVKEATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLVVGLVAAVLDIGLGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEILYGIPYLL
IVILLLIIMKPGLFTIIIALALTGWIGMARLVRAQVLSLKQREFVIAAERLGTSHMKIIYGHIIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPSLMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKK
HGTAFIFRKRNVSR

Sequences:

>Translated_334_residues
MGAYEINKQLLTNEEKKELTRNKDQQAISRKKEVFRKFVSNPIAVLGTVTLLLIIIFSLIGESLTTFTASEQVKEATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLVVGLVAAVLDIGLGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEILYGIPYLL
IVILLLIIMKPGLFTIIIALALTGWIGMARLVRAQVLSLKQREFVIAAERLGTSHMKIIYGHIIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPSLMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKK
HGTAFIFRKRNVSR
>Mature_333_residues
GAYEINKQLLTNEEKKELTRNKDQQAISRKKEVFRKFVSNPIAVLGTVTLLLIIIFSLIGESLTTFTASEQVKEATNLPP
SSEHWFGTDDLGRDIWARTWAGGKISLVVGLVAAVLDIGLGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEILYGIPYLLI
VILLLIIMKPGLFTIIIALALTGWIGMARLVRAQVLSLKQREFVIAAERLGTSHMKIIYGHIIPNLTGIIIVNLSFTIPA
AIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPSLMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKKH
GTAFIFRKRNVSR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=36.8770764119601, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1787054, Length=290, Percent_Identity=34.4827586206897, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1787760, Length=297, Percent_Identity=33.6700336700337, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1789889, Length=247, Percent_Identity=34.0080971659919, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1789964, Length=304, Percent_Identity=33.5526315789474, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1788505, Length=231, Percent_Identity=30.7359307359307, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1787549, Length=283, Percent_Identity=27.5618374558304, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36953; Mature: 36822

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYEINKQLLTNEEKKELTRNKDQQAISRKKEVFRKFVSNPIAVLGTVTLLLIIIFSLI
CCCHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTTFTASEQVKEATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLVVGLVAAVLDIG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEILYGIPYLLIVILLLIIMKPGLFTIIIAL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLVRAQVLSLKQREFVIAAERLGTSHMKIIYGHIIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPSLMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKRNRKEKKHGTAFIFRKRNVSR
CHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure 
GAYEINKQLLTNEEKKELTRNKDQQAISRKKEVFRKFVSNPIAVLGTVTLLLIIIFSLI
CCHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTTFTASEQVKEATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLVVGLVAAVLDIG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIVRGIEILYGIPYLLIVILLLIIMKPGLFTIIIAL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLVRAQVLSLKQREFVIAAERLGTSHMKIIYGHIIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPSLMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKRNRKEKKHGTAFIFRKRNVSR
CHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]