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The map label for this gene is ybcL [C]

Identifier: 221636316

GI number: 221636316

Start: 892614

End: 893204

Strand: Reverse

Name: ybcL [C]

Synonym: trd_A0910

Alternate gene names: 221636316

Gene position: 893204-892614 (Counterclockwise)

Preceding gene: 221636317

Following gene: 221636315

Centisome position: 97.33

GC content: 67.85

Gene sequence:

>591_bases
ATGAGGACCCGGCTCCTGGCCTTCCGTTGGAGCCTCACCTACCTCGCTCTCGCGGTGGTCGCAGGGAGTCTCGGTTGCGC
GACCGCAGGCACTAGTCCGACCGTTCCACTCGCAGCCGTCCGCATCCAGCTGACCAGCCCGGCGTTCACCACAAGCGGTA
CCCTGCCGACCGAGTACACCTGCGACGGCCCTGATCGTTCCCCACCGCTCAGCTGGTCGGAACCGCCTCCTGGGACGGCC
GCGTTCGTCCTGCTCGTCGAGGATCCCGATGCTCCCGGTGGAATCTTCACCCACTGGCTCCTCTACGATCTCCCCGCGGC
GACACGCTCCCTCCCGCCGGCCGTACCGCCCGACGAGACACTCCAAAGCGGTGCGCGGCAAGGCCGGAATGACTTCGGGA
CGGTCGGTTACCGCGGACCGTGTCCCCCGCCTGGTCGACCGCACCGGTACGTGTTCCGCCTGTACGCGCTCGATCGCCCG
ACTGGCCTCCCACCTGGAGCACAGCGGAACGAGATTCTGCGTGCCCTCGAGGGGCATATCCTGGCTATCGGTGAACTGGT
CGGCACCTACGGTCGCGAGCCGGTGCGTTAG

Upstream 100 bases:

>100_bases
CGGACGATCTTCCTCCGCGGGCCTTCCTGCGGTAGGCTCAGGACGGTCGATACGGGCGTTCTTTGGCTAAACCATGCGAC
CTCGCTTCTGCATCGCACGA

Downstream 100 bases:

>100_bases
TATTGTCGATGGAAAGGGAGACGCGATGCCCCGCCGTGGTGCACTACAACCGCCAGCGGAAGTCCGGCGTATGTTCGACC
GGATCGCCCCGCGCTACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRTRLLAFRWSLTYLALAVVAGSLGCATAGTSPTVPLAAVRIQLTSPAFTTSGTLPTEYTCDGPDRSPPLSWSEPPPGTA
AFVLLVEDPDAPGGIFTHWLLYDLPAATRSLPPAVPPDETLQSGARQGRNDFGTVGYRGPCPPPGRPHRYVFRLYALDRP
TGLPPGAQRNEILRALEGHILAIGELVGTYGREPVR

Sequences:

>Translated_196_residues
MRTRLLAFRWSLTYLALAVVAGSLGCATAGTSPTVPLAAVRIQLTSPAFTTSGTLPTEYTCDGPDRSPPLSWSEPPPGTA
AFVLLVEDPDAPGGIFTHWLLYDLPAATRSLPPAVPPDETLQSGARQGRNDFGTVGYRGPCPPPGRPHRYVFRLYALDRP
TGLPPGAQRNEILRALEGHILAIGELVGTYGREPVR
>Mature_196_residues
MRTRLLAFRWSLTYLALAVVAGSLGCATAGTSPTVPLAAVRIQLTSPAFTTSGTLPTEYTCDGPDRSPPLSWSEPPPGTA
AFVLLVEDPDAPGGIFTHWLLYDLPAATRSLPPAVPPDETLQSGARQGRNDFGTVGYRGPCPPPGRPHRYVFRLYALDRP
TGLPPGAQRNEILRALEGHILAIGELVGTYGREPVR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=133, Percent_Identity=42.8571428571429, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1786990, Length=124, Percent_Identity=39.5161290322581, Blast_Score=87, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20954; Mature: 20954

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRLLAFRWSLTYLALAVVAGSLGCATAGTSPTVPLAAVRIQLTSPAFTTSGTLPTEYT
CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCCCCEE
CDGPDRSPPLSWSEPPPGTAAFVLLVEDPDAPGGIFTHWLLYDLPAATRSLPPAVPPDET
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHH
LQSGARQGRNDFGTVGYRGPCPPPGRPHRYVFRLYALDRPTGLPPGAQRNEILRALEGHI
HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCE
LAIGELVGTYGREPVR
EEHHHHHHHCCCCCCC
>Mature Secondary Structure
MRTRLLAFRWSLTYLALAVVAGSLGCATAGTSPTVPLAAVRIQLTSPAFTTSGTLPTEYT
CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCCCCEE
CDGPDRSPPLSWSEPPPGTAAFVLLVEDPDAPGGIFTHWLLYDLPAATRSLPPAVPPDET
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHH
LQSGARQGRNDFGTVGYRGPCPPPGRPHRYVFRLYALDRPTGLPPGAQRNEILRALEGHI
HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCE
LAIGELVGTYGREPVR
EEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]