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The map label for this gene is spoVR [H]

Identifier: 221636279

GI number: 221636279

Start: 853726

End: 855096

Strand: Reverse

Name: spoVR [H]

Synonym: trd_A0873

Alternate gene names: 221636279

Gene position: 855096-853726 (Counterclockwise)

Preceding gene: 221636280

Following gene: 221636275

Centisome position: 93.17

GC content: 60.98

Gene sequence:

>1371_bases
GTGCGTGAGTTGGCACCGAGCGAACTTCGCGAACTGGAGCGCCGGATCGGAGCGATCTGGGAAATCGGGGAGCGCATGGG
GTTACGCCCGCTGCCGGTGCACTTCGAGGTCGTGCCGGCAACCGTGATGTACGAGATCGGAGCATACGGGCTGCCAGGAC
GCTTCTCGCATTGGACACATGGGAAGGCGTATCAAGTCCAAAAGACGCTGTACGACTACGGCTTGAGCAAGATCTACGAG
TTGGTGATCAATAGCCACCCCTGTCAGGCCTTCCTTTTGGAGACCAACACGCTCCTGCAAAACACGCTCGTGGCTGCACA
TGTCATGGCGCATGCCGACTTCTTCGCCAACAATGCGTACTTCGTTCGAACACGACGGGATATGGTCGAGATCGCGACGG
TGCACGCTGAGCGGATCGAGCGGTACGAGTTCGCCCACGGCAAGGAGGCGGTCGAACAGTTGCTGGACGCGGTGCTGGCG
ATCCAGGAGCACGTCGATCCGAGTCTGACGGAGATTCCCGTTCGGCGCGTGGCGGAGCGGGAACGGCGATCGAGGTCGCC
GTACGAGGATCTTTGGCGATTGGGTGAGCTGACCGACGATGCGGCGGACGAGCGCGAGACGCGGCAGCGCGAAACCCGGC
TCCCGGCTGAACCGGTGCGGGATCTCTTGCTCTTCATCCACGAGTACTCGCCGGTCCTGGAGGACTGGGAACGGGACGTG
GTGGCGATCGTCCGGGCGGAGATGCTTTATTTTCTGCCCCAGATCCAAACCAAGGTCGTGAACGAGGGGTGGGCGACTTT
TTGGCATGCGCGCATCGTGCGCGAACTCGAGTTGACGCCGGACGAGTATCTCGAGTTCGCACGCCTCCATGCTGGCGTCT
TGCAGCCGACAGCGAGACGGCTCAACCCGTACGCGTTGGGGTACGAGATTTTGCGCGACATCGAACGACGCTACGGAACC
GAGTACCTCTTCATGGTTCGGGAAATGGAAAACGATGTCTCACTGGTCCGGAACTACTTGACTGAGGAGTTAGTCGAACG
GCTGGACTTGTATCTCTACGAGCGGCGGGGTGAGGAGCTCGTGGTGGTCGACAAGGACTGGGAGGCGGTGCGGGATCGGC
TGGCGAGCGAGCTGGGTGGGAACCAGATTCCGGTCATCCTGGTAGAGGACGGCGATTACCACGGAAACCGCGAACTGTAC
CTGCGGCACGTGTGGGACGGGCGAAAGCTCGATCTGGCATGGGCGGAAAAGACGCTGGAGCACGTTTACCGGCTGTGGGG
ACGCCGCGTCTGGTTAGAGACACGAACTGAGAACGGAAACGACCTGCTCGTCCTCAGCTATCATCCGCGCGACGGTCACC
GCAAACGATAA

Upstream 100 bases:

>100_bases
GGTAGTCCCAAACTGGTGACGGTCACGATCACCGAGAAGGCGGACGTGTACCAGGCGCTGCGGCGCTTTTTCGGTCCCGA
GGTGGGGCAGGAGGTGGCGC

Downstream 100 bases:

>100_bases
CGAGAGTTGCAGTCGGTCGGTGCCGCGCGGACCATCCGCTCAGGAGGGACCCTGGTCCGGCCGGAGCAGGCTGGCGCGCA
GCTGAGTCTGCCGATGGGGG

Product: stage V sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MRELAPSELRELERRIGAIWEIGERMGLRPLPVHFEVVPATVMYEIGAYGLPGRFSHWTHGKAYQVQKTLYDYGLSKIYE
LVINSHPCQAFLLETNTLLQNTLVAAHVMAHADFFANNAYFVRTRRDMVEIATVHAERIERYEFAHGKEAVEQLLDAVLA
IQEHVDPSLTEIPVRRVAERERRSRSPYEDLWRLGELTDDAADERETRQRETRLPAEPVRDLLLFIHEYSPVLEDWERDV
VAIVRAEMLYFLPQIQTKVVNEGWATFWHARIVRELELTPDEYLEFARLHAGVLQPTARRLNPYALGYEILRDIERRYGT
EYLFMVREMENDVSLVRNYLTEELVERLDLYLYERRGEELVVVDKDWEAVRDRLASELGGNQIPVILVEDGDYHGNRELY
LRHVWDGRKLDLAWAEKTLEHVYRLWGRRVWLETRTENGNDLLVLSYHPRDGHRKR

Sequences:

>Translated_456_residues
MRELAPSELRELERRIGAIWEIGERMGLRPLPVHFEVVPATVMYEIGAYGLPGRFSHWTHGKAYQVQKTLYDYGLSKIYE
LVINSHPCQAFLLETNTLLQNTLVAAHVMAHADFFANNAYFVRTRRDMVEIATVHAERIERYEFAHGKEAVEQLLDAVLA
IQEHVDPSLTEIPVRRVAERERRSRSPYEDLWRLGELTDDAADERETRQRETRLPAEPVRDLLLFIHEYSPVLEDWERDV
VAIVRAEMLYFLPQIQTKVVNEGWATFWHARIVRELELTPDEYLEFARLHAGVLQPTARRLNPYALGYEILRDIERRYGT
EYLFMVREMENDVSLVRNYLTEELVERLDLYLYERRGEELVVVDKDWEAVRDRLASELGGNQIPVILVEDGDYHGNRELY
LRHVWDGRKLDLAWAEKTLEHVYRLWGRRVWLETRTENGNDLLVLSYHPRDGHRKR
>Mature_456_residues
MRELAPSELRELERRIGAIWEIGERMGLRPLPVHFEVVPATVMYEIGAYGLPGRFSHWTHGKAYQVQKTLYDYGLSKIYE
LVINSHPCQAFLLETNTLLQNTLVAAHVMAHADFFANNAYFVRTRRDMVEIATVHAERIERYEFAHGKEAVEQLLDAVLA
IQEHVDPSLTEIPVRRVAERERRSRSPYEDLWRLGELTDDAADERETRQRETRLPAEPVRDLLLFIHEYSPVLEDWERDV
VAIVRAEMLYFLPQIQTKVVNEGWATFWHARIVRELELTPDEYLEFARLHAGVLQPTARRLNPYALGYEILRDIERRYGT
EYLFMVREMENDVSLVRNYLTEELVERLDLYLYERRGEELVVVDKDWEAVRDRLASELGGNQIPVILVEDGDYHGNRELY
LRHVWDGRKLDLAWAEKTLEHVYRLWGRRVWLETRTENGNDLLVLSYHPRDGHRKR

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=476, Percent_Identity=32.3529411764706, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 53843; Mature: 53843

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELAPSELRELERRIGAIWEIGERMGLRPLPVHFEVVPATVMYEIGAYGLPGRFSHWTH
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCC
GKAYQVQKTLYDYGLSKIYELVINSHPCQAFLLETNTLLQNTLVAAHVMAHADFFANNAY
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEE
FVRTRRDMVEIATVHAERIERYEFAHGKEAVEQLLDAVLAIQEHVDPSLTEIPVRRVAER
EEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ERRSRSPYEDLWRLGELTDDAADERETRQRETRLPAEPVRDLLLFIHEYSPVLEDWERDV
HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VAIVRAEMLYFLPQIQTKVVNEGWATFWHARIVRELELTPDEYLEFARLHAGVLQPTARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHH
LNPYALGYEILRDIERRYGTEYLFMVREMENDVSLVRNYLTEELVERLDLYLYERRGEEL
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVVDKDWEAVRDRLASELGGNQIPVILVEDGDYHGNRELYLRHVWDGRKLDLAWAEKTLE
EEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEHHHHHHHHH
HVYRLWGRRVWLETRTENGNDLLVLSYHPRDGHRKR
HHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRELAPSELRELERRIGAIWEIGERMGLRPLPVHFEVVPATVMYEIGAYGLPGRFSHWTH
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCC
GKAYQVQKTLYDYGLSKIYELVINSHPCQAFLLETNTLLQNTLVAAHVMAHADFFANNAY
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEE
FVRTRRDMVEIATVHAERIERYEFAHGKEAVEQLLDAVLAIQEHVDPSLTEIPVRRVAER
EEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ERRSRSPYEDLWRLGELTDDAADERETRQRETRLPAEPVRDLLLFIHEYSPVLEDWERDV
HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
VAIVRAEMLYFLPQIQTKVVNEGWATFWHARIVRELELTPDEYLEFARLHAGVLQPTARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHH
LNPYALGYEILRDIERRYGTEYLFMVREMENDVSLVRNYLTEELVERLDLYLYERRGEEL
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVVDKDWEAVRDRLASELGGNQIPVILVEDGDYHGNRELYLRHVWDGRKLDLAWAEKTLE
EEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEHHHHHHHHH
HVYRLWGRRVWLETRTENGNDLLVLSYHPRDGHRKR
HHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]