Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636255

Identifier: 221636255

GI number: 221636255

Start: 832346

End: 832567

Strand: Reverse

Name: 221636255

Synonym: trd_A0849

Alternate gene names: NA

Gene position: 832567-832346 (Counterclockwise)

Preceding gene: 221636256

Following gene: 221636254

Centisome position: 90.72

GC content: 63.96

Gene sequence:

>222_bases
GTGGCGATCGGTCTGGCAGCGGCTGATGGCGATACCGAAATCGACACGATCGTCGCCGTGCATCGATGGGGTGAGGTGGT
ACCACCGTGCGGGATGTGCCGGGAACTCATGACTGACCAGGCATCGGAAGCTCGGGTGATCGTGCCGGACGGCGGCGGTG
AGACGGGCGTTGCCTTCGATTGGCTTCTACCGCTGCACGACGAGCGTCGTGTGGGTCCATGA

Upstream 100 bases:

>100_bases
AAACAGGGCTGGCAGCAGATCGGTCGTGCACTGCGGACACGATCCAGAATGGTGTCCAGTGCGGTGCATCTGGAGGCGAC
GATCGGTCTCTGCTGAAGCG

Downstream 100 bases:

>100_bases
GTGAGCATTCGTGATCGGGTGTCCGATCGCCCACGATATTCAACGTCGCGGACGACGCGAGGAGTCTGGGGAATTCAGCG
ACTTTCGGCGTTCCGGTGTC

Product: blasticidin-S deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MAIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFDWLLPLHDERRVGP

Sequences:

>Translated_73_residues
MAIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFDWLLPLHDERRVGP
>Mature_72_residues
AIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFDWLLPLHDERRVGP

Specific function: Unknown

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7772; Mature: 7641

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFD
CCEEECCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEE
WLLPLHDERRVGP
EEECCCCCCCCCC
>Mature Secondary Structure 
AIGLAAADGDTEIDTIVAVHRWGEVVPPCGMCRELMTDQASEARVIVPDGGGETGVAFD
CEEECCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEE
WLLPLHDERRVGP
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA