Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636220

Identifier: 221636220

GI number: 221636220

Start: 800663

End: 801670

Strand: Reverse

Name: 221636220

Synonym: trd_A0814

Alternate gene names: NA

Gene position: 801670-800663 (Counterclockwise)

Preceding gene: 221636221

Following gene: 221636219

Centisome position: 87.35

GC content: 67.16

Gene sequence:

>1008_bases
ATGCTGTCCGGCATACGTCGCCTCGTCCTCGTGGGGATGGTGATTTTGGCCGCGGTGCCGTTCGGCTCGGCCGCCGCACC
GCCGAGCGCGTGCTTGGCGGTAGGTGACTCGCTCGCTGCCGGTGTGGGAAGTACGTTGCCGCGAGAACGAAGTGCGGCCG
CGCTGCTCTGCGAGTGGGCGAGCACCTACTGGGGGGAGAAGAGCGAGCTCGTGAGTCTCGCGGTGCCGGGAGAACGCACC
GAATCGTTTCTGCGCGGTGGGCAAGCGGAACGACTGCGCCAGACGGTGGCTCGCCTGCGAGCAGAGGGGCGGGCGATCCG
CTTCGTGCTGATCAGTCTGGGTGGGAACGATCTTCTCCAACTCCGAGCCGCCGATGAGGTCGAACGGGAGGAGCAACTTG
CAGCCTTCGAGGCGAACTATGCCGAGGCGATGCGGGTGATCCGCAGCGCTGTCGGCGATGTTCCGCTCCTGGCCCTCACG
CTCTACGACCCGACCGAAGGGGATGCCAGGGCACCGCGGAGCGACAGCTGGTGGATCGCGCAGTTCGATCGGGCGATCCG
AGCTGGTGCGGAGTCAGTCGGGGCGCTCGTGGTCGATCTGGACAAGGAGTTCCGGGGCCGGACGGGCGAGTGGACCTGGT
GGCCGGTCGATATCCATCCGACCAACGCGGGATATGCAGCGATCGCTCGTGCGGCGTGGCGAGCGCTCGCCTGGGATCGC
CAGGCACCACAGGTGGTGATCGAGCGGCCAGAGGCAGGAAGCCGTGTGGAGAGGCGGTTCCTGACCGTGCGGGCACGAAT
CAGCGATCTCGGCGGGATCGAACGCGTCGGGTTGTGGGTGGACGGGCAGGAGATCGGTACCCTCGATCCATTGCCGGGGG
CCGACGAATGGATCACACTGTGGGAGACGCCGTGGCCGTTACCAGGCCCACCGCTCCGACTCGAAGTCCGTGCTGTCGAT
CGAGCAGGCAACGAGGGCCGGGCAGCAGTGGAACTCGTGCGACCATGA

Upstream 100 bases:

>100_bases
ACGTGGAGGAGGCGCTGGCAGCGCTCAGTCACGAGGAAGTACGCGAGTTGGTCGCGACGACGATGCGTCGCATCGGGGTT
CCTGTCGGAACGAGCCGATG

Downstream 100 bases:

>100_bases
GTGGGGCGACGACGAAACGACCGGGAAACGACTCGCTCGGTCCCGATTTGGAAGGGCGCTTGGGAGCGTTCACGCTTTCC
GATCTTCTCCAGATGATCGG

Product: lipolytic enzyme, G-D-S-L

Products: NA

Alternate protein names: Lipolytic G-D-S-L; Lipolytic Protein G-D-S-L Family

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWASTYWGEKSELVSLAVPGERT
ESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQLRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALT
LYDPTEGDARAPRSDSWWIAQFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR
QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITLWETPWPLPGPPLRLEVRAVD
RAGNEGRAAVELVRP

Sequences:

>Translated_335_residues
MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWASTYWGEKSELVSLAVPGERT
ESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQLRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALT
LYDPTEGDARAPRSDSWWIAQFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR
QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITLWETPWPLPGPPLRLEVRAVD
RAGNEGRAAVELVRP
>Mature_335_residues
MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWASTYWGEKSELVSLAVPGERT
ESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQLRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALT
LYDPTEGDARAPRSDSWWIAQFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR
QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITLWETPWPLPGPPLRLEVRAVD
RAGNEGRAAVELVRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36497; Mature: 36497

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWA
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHH
STYWGEKSELVSLAVPGERTESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQ
HHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEE
LRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALTLYDPTEGDARAPRSDSWWIA
EECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH
QFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR
HHHHHHHHCHHHHCEEEEEECHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCC
QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITL
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE
WETPWPLPGPPLRLEVRAVDRAGNEGRAAVELVRP
ECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MLSGIRRLVLVGMVILAAVPFGSAAAPPSACLAVGDSLAAGVGSTLPRERSAAALLCEWA
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHH
STYWGEKSELVSLAVPGERTESFLRGGQAERLRQTVARLRAEGRAIRFVLISLGGNDLLQ
HHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEE
LRAADEVEREEQLAAFEANYAEAMRVIRSAVGDVPLLALTLYDPTEGDARAPRSDSWWIA
EECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHH
QFDRAIRAGAESVGALVVDLDKEFRGRTGEWTWWPVDIHPTNAGYAAIARAAWRALAWDR
HHHHHHHHCHHHHCEEEEEECHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCC
QAPQVVIERPEAGSRVERRFLTVRARISDLGGIERVGLWVDGQEIGTLDPLPGADEWITL
CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEE
WETPWPLPGPPLRLEVRAVDRAGNEGRAAVELVRP
ECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA