Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636195

Identifier: 221636195

GI number: 221636195

Start: 773222

End: 774391

Strand: Reverse

Name: 221636195

Synonym: trd_A0789

Alternate gene names: NA

Gene position: 774391-773222 (Counterclockwise)

Preceding gene: 221636196

Following gene: 221636194

Centisome position: 84.38

GC content: 68.8

Gene sequence:

>1170_bases
GTGGAGCGACGGCCTCGCCGAGAACGGGTCTTGGCTGCCCTGATCATCCTGGTCCCGCCACTCGCCGGGGTATTACTCTT
CGTACCCCGCTGGCGAGCGATCGCGGTGCGGGGGTTGCTGGCTTGGGGGCATGTCGTCCTCGCCCTCGTCGCCTTCCTCT
CCTTCGCCGCTGTCAACGCGCAACGCCTCGACCAGGGTGACCGGTACGCCGACCTCGGCATGCTCTTCCTCTTCATCTGG
GTCGTCAGCGCCCTCGTGATCCCGTTCGGGTTGGCGATCCGTCAGCTCATCGCTGGGGGCAGCACGAGCGCCGTCCCACG
CCCCTGGCGAGTCGCGCTGCGCTTCCGTTCCGACGACAGGACCGAGAGCCTCGCCATGCAGGTAGAACGGTGGCTCGCCG
AGCAGAGAGGCGCGCGAGCCGTGAACGGTGGCTGGATCGTCATCGAGCCGACGGTCATCGACGAGCAGAGCATGTGGTCC
TCACTGCTCGTGGTCCGCGGGGCGCTCGCGCTGCTGCTGGACAACGACGGAAGGACGATGACCGCGCTCTACCGCGTGTA
TCCCCCGTCACGCTGGCCGCTCGCTCGGGACTTCTGGTCGCGTGCTGTCCGCCGCCAGGCCCTCCTGCTCGCCGAACGGT
GGAATGCGCGCGTCGAGCCGATCGAGCCGCCGTCGCTGGTGCCGGAGATGGAGGGTGCGCTTGCTGAGGGTGTGCAGCTG
GCCTGGGAGCTGGAGCGTCTGGACGTCCGGGGAGTCGACCTGACAGTCACTGCTGTCGTCGCGGTAGTGACACTGGTCCT
GGTAGTAACACTTGGGCTGCCACTCTTTCCGACCATGGACGGCGCACTCGTCGGTCTGGCTGGGTTACTCGCCGCTCTGC
TGTGCGCGGTGATCCTCAGCGTGGCCTGGCTTGCCTACCACGTACGCGTGTCGCTCCGCGCCTTCGCGGCGGGAAGCGAT
CGACCACCGCGGTTCTCGCTCGCCGCGTTCCTCCGGCGCCGTCCGCTGGTGCTGTTCCTCGCCGTCGTCGGCGCAACGGC
GTTCGTGGCCAGTCTCGGCTGGGCCACATCACCCAGAGCGCCAGCGTGGGCAGCGCTCGTGAGCGTCGCGGTCCTGGTGC
TCCCGCCGCTCGTCGCGCTGTGGCTCGGTACCCGGCTGGCCGAGCAGTAG

Upstream 100 bases:

>100_bases
GGCAGCGCGCCAGGCACGCCAGGTCTCGCTCCCGTTACGATAGATTCTGGCGAATGAGAGGATTCCTGACGACGGAAACC
CTGTTACGGGGGAGCGCTCA

Downstream 100 bases:

>100_bases
TGTCTCTCCCGACCGGATGACCGCCTGGGGAAAGCCTGGCACCGTTCAGGTGTGTGCGGCGCAAGGGGGAAGCTCCCGCG
TAGCAGGGCGCGATTCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MERRPRRERVLAALIILVPPLAGVLLFVPRWRAIAVRGLLAWGHVVLALVAFLSFAAVNAQRLDQGDRYADLGMLFLFIW
VVSALVIPFGLAIRQLIAGGSTSAVPRPWRVALRFRSDDRTESLAMQVERWLAEQRGARAVNGGWIVIEPTVIDEQSMWS
SLLVVRGALALLLDNDGRTMTALYRVYPPSRWPLARDFWSRAVRRQALLLAERWNARVEPIEPPSLVPEMEGALAEGVQL
AWELERLDVRGVDLTVTAVVAVVTLVLVVTLGLPLFPTMDGALVGLAGLLAALLCAVILSVAWLAYHVRVSLRAFAAGSD
RPPRFSLAAFLRRRPLVLFLAVVGATAFVASLGWATSPRAPAWAALVSVAVLVLPPLVALWLGTRLAEQ

Sequences:

>Translated_389_residues
MERRPRRERVLAALIILVPPLAGVLLFVPRWRAIAVRGLLAWGHVVLALVAFLSFAAVNAQRLDQGDRYADLGMLFLFIW
VVSALVIPFGLAIRQLIAGGSTSAVPRPWRVALRFRSDDRTESLAMQVERWLAEQRGARAVNGGWIVIEPTVIDEQSMWS
SLLVVRGALALLLDNDGRTMTALYRVYPPSRWPLARDFWSRAVRRQALLLAERWNARVEPIEPPSLVPEMEGALAEGVQL
AWELERLDVRGVDLTVTAVVAVVTLVLVVTLGLPLFPTMDGALVGLAGLLAALLCAVILSVAWLAYHVRVSLRAFAAGSD
RPPRFSLAAFLRRRPLVLFLAVVGATAFVASLGWATSPRAPAWAALVSVAVLVLPPLVALWLGTRLAEQ
>Mature_389_residues
MERRPRRERVLAALIILVPPLAGVLLFVPRWRAIAVRGLLAWGHVVLALVAFLSFAAVNAQRLDQGDRYADLGMLFLFIW
VVSALVIPFGLAIRQLIAGGSTSAVPRPWRVALRFRSDDRTESLAMQVERWLAEQRGARAVNGGWIVIEPTVIDEQSMWS
SLLVVRGALALLLDNDGRTMTALYRVYPPSRWPLARDFWSRAVRRQALLLAERWNARVEPIEPPSLVPEMEGALAEGVQL
AWELERLDVRGVDLTVTAVVAVVTLVLVVTLGLPLFPTMDGALVGLAGLLAALLCAVILSVAWLAYHVRVSLRAFAAGSD
RPPRFSLAAFLRRRPLVLFLAVVGATAFVASLGWATSPRAPAWAALVSVAVLVLPPLVALWLGTRLAEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42602; Mature: 42602

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRPRRERVLAALIILVPPLAGVLLFVPRWRAIAVRGLLAWGHVVLALVAFLSFAAVNA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLDQGDRYADLGMLFLFIWVVSALVIPFGLAIRQLIAGGSTSAVPRPWRVALRFRSDDR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCH
TESLAMQVERWLAEQRGARAVNGGWIVIEPTVIDEQSMWSSLLVVRGALALLLDNDGRTM
HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCEE
TALYRVYPPSRWPLARDFWSRAVRRQALLLAERWNARVEPIEPPSLVPEMEGALAEGVQL
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
AWELERLDVRGVDLTVTAVVAVVTLVLVVTLGLPLFPTMDGALVGLAGLLAALLCAVILS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VAWLAYHVRVSLRAFAAGSDRPPRFSLAAFLRRRPLVLFLAVVGATAFVASLGWATSPRA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
PAWAALVSVAVLVLPPLVALWLGTRLAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERRPRRERVLAALIILVPPLAGVLLFVPRWRAIAVRGLLAWGHVVLALVAFLSFAAVNA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLDQGDRYADLGMLFLFIWVVSALVIPFGLAIRQLIAGGSTSAVPRPWRVALRFRSDDR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCH
TESLAMQVERWLAEQRGARAVNGGWIVIEPTVIDEQSMWSSLLVVRGALALLLDNDGRTM
HHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCCEE
TALYRVYPPSRWPLARDFWSRAVRRQALLLAERWNARVEPIEPPSLVPEMEGALAEGVQL
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
AWELERLDVRGVDLTVTAVVAVVTLVLVVTLGLPLFPTMDGALVGLAGLLAALLCAVILS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VAWLAYHVRVSLRAFAAGSDRPPRFSLAAFLRRRPLVLFLAVVGATAFVASLGWATSPRA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC
PAWAALVSVAVLVLPPLVALWLGTRLAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA