| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636148
Identifier: 221636148
GI number: 221636148
Start: 730829
End: 731260
Strand: Reverse
Name: 221636148
Synonym: trd_A0742
Alternate gene names: NA
Gene position: 731260-730829 (Counterclockwise)
Preceding gene: 221636149
Following gene: 221636147
Centisome position: 79.68
GC content: 69.21
Gene sequence:
>432_bases ATGACGGTCGGTCGGGAGCAGCCGCGAGCGCTCCTGTCGAGGATCGACCAGCATCCGGAACGCCGCGAGGAGCTGCGGTG TCATGTTCTCGCGCAGGAATTGCTCGCGTTGCCAGCGGTCGTCGCGCAGCAGGGTGACCGGTTGGATCGCGTCGAGGGGG TGCCGCTCGACTGCGCGATGCGCTGGCTCGCGGCTTCGCGCGAGCGCCGTCCAGACTTCCTGAGGCGACTCCTCGCTGCC GCGGAGCGGCTCGCTGCGACGTTCCACGAGGTGGATTACCAGGACGAGCGTATGGCCTGGCAGGAGGAGCGAACCGGATC GACCAGCGCATGGAGCAGGACGACGCGCAGCTGGCTCATCTGGGGGAACCCGCTCAGCGGCCCGAGCGCGAGCGGCAGTC ATTGCGCAGCGAGGTCGGCTGGCCGATGGTGA
Upstream 100 bases:
>100_bases GCCAGCCGAGCGAGTGTACCGCGGTCGAGTCGGATGTCGGTGCAAAGCGGCTGGTAGACTGGTGGACGGATCACCTCCCC AGCGAGGAGGGGGACAGGCG
Downstream 100 bases:
>100_bases CAGCGAGTGGGATGGTCGCGGCTGATGCCGCCGATGCGCTCGTGCGGGCTGGGGAGCAGAACGGGTTCGCTGTTCCGGCT ATCGCGAGGAGTCTCGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTVGREQPRALLSRIDQHPERREELRCHVLAQELLALPAVVAQQGDRLDRVEGVPLDCAMRWLAASRERRPDFLRRLLAA AERLAATFHEVDYQDERMAWQEERTGSTSAWSRTTRSWLIWGNPLSGPSASGSHCAARSAGRW
Sequences:
>Translated_143_residues MTVGREQPRALLSRIDQHPERREELRCHVLAQELLALPAVVAQQGDRLDRVEGVPLDCAMRWLAASRERRPDFLRRLLAA AERLAATFHEVDYQDERMAWQEERTGSTSAWSRTTRSWLIWGNPLSGPSASGSHCAARSAGRW >Mature_142_residues TVGREQPRALLSRIDQHPERREELRCHVLAQELLALPAVVAQQGDRLDRVEGVPLDCAMRWLAASRERRPDFLRRLLAAA ERLAATFHEVDYQDERMAWQEERTGSTSAWSRTTRSWLIWGNPLSGPSASGSHCAARSAGRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16273; Mature: 16141
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGREQPRALLSRIDQHPERREELRCHVLAQELLALPAVVAQQGDRLDRVEGVPLDCAM CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH RWLAASRERRPDFLRRLLAAAERLAATFHEVDYQDERMAWQEERTGSTSAWSRTTRSWLI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCEEE WGNPLSGPSASGSHCAARSAGRW ECCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure TVGREQPRALLSRIDQHPERREELRCHVLAQELLALPAVVAQQGDRLDRVEGVPLDCAM CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH RWLAASRERRPDFLRRLLAAAERLAATFHEVDYQDERMAWQEERTGSTSAWSRTTRSWLI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCCCEEE WGNPLSGPSASGSHCAARSAGRW ECCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA