Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636147

Identifier: 221636147

GI number: 221636147

Start: 730467

End: 730817

Strand: Reverse

Name: 221636147

Synonym: trd_A0741

Alternate gene names: NA

Gene position: 730817-730467 (Counterclockwise)

Preceding gene: 221636148

Following gene: 221636146

Centisome position: 79.63

GC content: 67.52

Gene sequence:

>351_bases
ATGGTCGCGGCTGATGCCGCCGATGCGCTCGTGCGGGCTGGGGAGCAGAACGGGTTCGCTGTTCCGGCTATCGCGAGGAG
TCTCGCTCGCGACGGCGAACGGGGTCAGATCGCCTCGGCGATCGATTTCGACGGAGAGCGGGTCTGGGTACTGGTCGAGG
TCCAGGTGCAGCTGCGGGACAGTCGCACGTGGTTGCGAAGATCTCCTCGTCAGGTTTCCGCGAGCGACGCGCTCGTGCCG
CTCTCGATCCGCCGCTGCTCCCGATGTGTTTGGGCAGCGGGTATACGGGGAGGCAGGAGTGGCCTCTCGGGGTGGGTGTC
CTCTCGCGGCGCGGTGAGCATCTCGCGCTAG

Upstream 100 bases:

>100_bases
CGCGCAGCTGGCTCATCTGGGGGAACCCGCTCAGCGGCCCGAGCGCGAGCGGCAGTCATTGCGCAGCGAGGTCGGCTGGC
CGATGGTGACAGCGAGTGGG

Downstream 100 bases:

>100_bases
CGATCCAGCGCGGAGGGAGGGCGCGAGCGGGGCGACGCGCACGAGCCTGTCGCAGCCGTCGGTTCGATCCCACCAGGCGA
TCAGGCTGGCCGCAGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MVAADAADALVRAGEQNGFAVPAIARSLARDGERGQIASAIDFDGERVWVLVEVQVQLRDSRTWLRRSPRQVSASDALVP
LSIRRCSRCVWAAGIRGGRSGLSGWVSSRGAVSISR

Sequences:

>Translated_116_residues
MVAADAADALVRAGEQNGFAVPAIARSLARDGERGQIASAIDFDGERVWVLVEVQVQLRDSRTWLRRSPRQVSASDALVP
LSIRRCSRCVWAAGIRGGRSGLSGWVSSRGAVSISR
>Mature_116_residues
MVAADAADALVRAGEQNGFAVPAIARSLARDGERGQIASAIDFDGERVWVLVEVQVQLRDSRTWLRRSPRQVSASDALVP
LSIRRCSRCVWAAGIRGGRSGLSGWVSSRGAVSISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12447; Mature: 12447

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAADAADALVRAGEQNGFAVPAIARSLARDGERGQIASAIDFDGERVWVLVEVQVQLRD
CCCCCHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEECC
SRTWLRRSPRQVSASDALVPLSIRRCSRCVWAAGIRGGRSGLSGWVSSRGAVSISR
CHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECC
>Mature Secondary Structure
MVAADAADALVRAGEQNGFAVPAIARSLARDGERGQIASAIDFDGERVWVLVEVQVQLRD
CCCCCHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEEEECC
SRTWLRRSPRQVSASDALVPLSIRRCSRCVWAAGIRGGRSGLSGWVSSRGAVSISR
CHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA