Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636095

Identifier: 221636095

GI number: 221636095

Start: 677026

End: 678045

Strand: Reverse

Name: 221636095

Synonym: trd_A0689

Alternate gene names: NA

Gene position: 678045-677026 (Counterclockwise)

Preceding gene: 221636096

Following gene: 221636094

Centisome position: 73.88

GC content: 70.59

Gene sequence:

>1020_bases
ATGCAGTGGGTGTTGGCCTACGACGGAGCTTGCGGGCGTTGCCGGGCGCTCGCCGAGCGGGTGGTCGCGCTGGGGGCGGG
GCGGCTGGTGGCGCGGAGCCTGCGCGACCCGGAGGTGGCGGCCTGGCGGGAGCGGCTCTTGGGGGCCGGGGCGCCGTGGG
AGCCGGTGCTCTTTGCGGTGGAGGGGGAGGGAGCGGTCCGGGCACTGACCGGGCGGCGGCTGGTGCTCGAGCTCGTACGG
CTGCTGGGGGTGCGGCGGGGGCTGGCACTGGCGAGGGAGCTAGGGGACCTGGCTTCGCCAGCGGGAGCGGGTCCGGTGCT
GACGCGGCGGCGAGTACTCGGGCGGCTGGCTGGACTCGGCGCCGCGCTCGGGCTTCTGGTGAGCGGGAAGCTGGCGGTGC
CGGGTGGGGTGCATGCCCAGGGAGCGGGGGAAGAGCGCCCGTGGTGGGCGGTGGAGCCGATAAAGACGAGCCTGCTCGAT
CCGGCAGCTGGGGAGAAACTCCTGGCGGAGCTCGTGGCCGGGCCTGACCTTCGGGCAGTACTCGGTGCGGCAGAGCTGGC
CGAGGTGCAGGCAGCCGAGCACCGGCTGGCCGACGGGCGGACGCTGTGGGCCCTGGCGGGGGTGCTGCCCGACGACGAGG
TGGTGGTGGCGTACCGGGACGACGCAGGGCGAATTGAAGCGCTGCGCTACCGCGTGGTAGGGGAGGTCGCCGAGCTGCGG
GCGGTGAGTGCGGGTGGGGTGGTGCAGTATCCGGCGGGCGCTGGTGGGGGTGACTTCGGGTTGGCCGGCTGCCCACCGGG
TTACTGGCCCTGCCAGCGATGTTGCGGTGTTAATCTGCGCGAGATCGAAAATAGATGTGCGGGCTGTTGGGTCCCTTGCT
TGTCCTGTGCGTTTATCCGGACTGTTGAAGGGTGTACCCCGTGTCTCATTTGTCTGTTCGTCTTTTGTCCCTATGTGGTG
TACCAGGCTTGCCGCTTTTGTCGGACTTGCTGTCCCGAGTCACCACCTTGGGGGCCATAG

Upstream 100 bases:

>100_bases
GGCCGGATGACAGCGCTGTCATCCAAAGGTGACTGGAAAGAGCACCCGACCCGGTGGGATAGTGGCAATAGACACGGTAT
CACTCGAAGGAGGTCTGCGC

Downstream 100 bases:

>100_bases
GGGGTTGCGATGGGGCTTGGCGCGCTCCTCTTGATCATCGTCTGGGTTGTCTGCTTCGTCTATCTGGGCATGCTCGTCGT
GCAGATGGTCCGTGCGCGAC

Product: Tat (twin-arginine translocation) pathway signal sequence domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAVEGEGAVRALTGRRLVLELVR
LLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLGAALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLD
PAAGEKLLAELVAGPDLRAVLGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR
AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIRTVEGCTPCLICLFVFCPYVV
YQACRFCRTCCPESPPWGP

Sequences:

>Translated_339_residues
MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAVEGEGAVRALTGRRLVLELVR
LLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLGAALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLD
PAAGEKLLAELVAGPDLRAVLGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR
AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIRTVEGCTPCLICLFVFCPYVV
YQACRFCRTCCPESPPWGP
>Mature_339_residues
MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAVEGEGAVRALTGRRLVLELVR
LLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLGAALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLD
PAAGEKLLAELVAGPDLRAVLGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR
AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIRTVEGCTPCLICLFVFCPYVV
YQACRFCRTCCPESPPWGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35797; Mature: 35797

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAV
CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE
EGEGAVRALTGRRLVLELVRLLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLG
ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLDPAAGEKLLAELVAGPDLRAV
HHHHHHHCCCEECCCCCCCCCCCCCCCCEEECHHHHHHCCCCCHHHHHHHHHCCCCHHHH
LGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR
HHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIR
HHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TVEGCTPCLICLFVFCPYVVYQACRFCRTCCPESPPWGP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQWVLAYDGACGRCRALAERVVALGAGRLVARSLRDPEVAAWRERLLGAGAPWEPVLFAV
CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEE
EGEGAVRALTGRRLVLELVRLLGVRRGLALARELGDLASPAGAGPVLTRRRVLGRLAGLG
ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AALGLLVSGKLAVPGGVHAQGAGEERPWWAVEPIKTSLLDPAAGEKLLAELVAGPDLRAV
HHHHHHHCCCEECCCCCCCCCCCCCCCCEEECHHHHHHCCCCCHHHHHHHHHCCCCHHHH
LGAAELAEVQAAEHRLADGRTLWALAGVLPDDEVVVAYRDDAGRIEALRYRVVGEVAELR
HHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
AVSAGGVVQYPAGAGGGDFGLAGCPPGYWPCQRCCGVNLREIENRCAGCWVPCLSCAFIR
HHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TVEGCTPCLICLFVFCPYVVYQACRFCRTCCPESPPWGP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA