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The map label for this gene is yjfR [C]

Identifier: 221635996

GI number: 221635996

Start: 580280

End: 581116

Strand: Reverse

Name: yjfR [C]

Synonym: trd_A0590

Alternate gene names: 221635996

Gene position: 581116-580280 (Counterclockwise)

Preceding gene: 221635997

Following gene: 221635995

Centisome position: 63.32

GC content: 66.91

Gene sequence:

>837_bases
ATGGAGGGGGTCGCGGCGATTCTTCAGCGGCTGGCGCAGCGACACGACTCGCTCGGGATCGTGTGGCTCGGGCAAGCGAG
CGTCGCGCTGGCGGGGTCAGGCCGAATCGTCCTGATCGATCCGTTCCTCTCGCCGCATCCCGACCGGTTGGTACCGCCGA
TGGTTGCGCCGGAGGAACTCGCGTCGGTCGACCTCGTGCTCGTGACGCACGAGCACTGGGATCACTTGGATGGGCCGACC
TGTGCGGCGATCGCGCGGGTGGCGCCGGGAGCGCGTTTCGCTTGCCCGCAGCCGATCGTCGACCAGTTCGGCGCGCTCGG
CATCGACCGCGAGCGCGTGCAGGGAATGCGGCCAGGCCAAGCCGAGGTCTTCGCTGACGTCACTGTCTGGCCGGTCGCAG
CCATGCATGGTCTGCATGCGGCTGATGCGTATGGCTTCGGTGAGGTCGATGGCGTACCGCGCTTTCTCGGCTACGTGGTC
GAGCTGGCTGGCGTGCGCCTGTACCATGCCGGGGACACGATCGCGTACGCAGGCCTCGCCGAGACGGTGCGCGCGTTACG
ACCCCAGGTCGCGATGCTGCCGATCAATGGCCGGGACTGGTATCGGGAGCAGATGGATATCGTGGGCAACCTGGATATTC
GGGAGGCGGCACATCTGGCGGCGGACATCGGCGTCGAACTCCTGATTCCCCTTCACTACGACATGTTCGCGGCCAATCTG
GCTGACCCTGGTGCACTCGTTCGCTATGTCCACGATCGGAAGCTGCCGGTCCATGTCCTGGTGCTGCGGCCGGGCAAGCC
GGTGCTGGTGCAGCCCGTGGGTCGGGAGGAGCTGTGA

Upstream 100 bases:

>100_bases
CACAGCGTGGTCGCGCAGCATCCGCGGCGGCGCGTCTTTTTCAATCTTTTCGCCGAAGAGTGGCACCGACGGCAAGCGGA
GCGCGAGTGAGGAGCGGACG

Downstream 100 bases:

>100_bases
CGAGATCGACAGTCGTTCGCCGCAGCAGGAGCGGATCCTAAGCGAATCGATTCCGGTGACGGAGCGCCGTACGGATCAGG
CAATGACCGGTGCAGCCGGG

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MEGVAAILQRLAQRHDSLGIVWLGQASVALAGSGRIVLIDPFLSPHPDRLVPPMVAPEELASVDLVLVTHEHWDHLDGPT
CAAIARVAPGARFACPQPIVDQFGALGIDRERVQGMRPGQAEVFADVTVWPVAAMHGLHAADAYGFGEVDGVPRFLGYVV
ELAGVRLYHAGDTIAYAGLAETVRALRPQVAMLPINGRDWYREQMDIVGNLDIREAAHLAADIGVELLIPLHYDMFAANL
ADPGALVRYVHDRKLPVHVLVLRPGKPVLVQPVGREEL

Sequences:

>Translated_278_residues
MEGVAAILQRLAQRHDSLGIVWLGQASVALAGSGRIVLIDPFLSPHPDRLVPPMVAPEELASVDLVLVTHEHWDHLDGPT
CAAIARVAPGARFACPQPIVDQFGALGIDRERVQGMRPGQAEVFADVTVWPVAAMHGLHAADAYGFGEVDGVPRFLGYVV
ELAGVRLYHAGDTIAYAGLAETVRALRPQVAMLPINGRDWYREQMDIVGNLDIREAAHLAADIGVELLIPLHYDMFAANL
ADPGALVRYVHDRKLPVHVLVLRPGKPVLVQPVGREEL
>Mature_278_residues
MEGVAAILQRLAQRHDSLGIVWLGQASVALAGSGRIVLIDPFLSPHPDRLVPPMVAPEELASVDLVLVTHEHWDHLDGPT
CAAIARVAPGARFACPQPIVDQFGALGIDRERVQGMRPGQAEVFADVTVWPVAAMHGLHAADAYGFGEVDGVPRFLGYVV
ELAGVRLYHAGDTIAYAGLAETVRALRPQVAMLPINGRDWYREQMDIVGNLDIREAAHLAADIGVELLIPLHYDMFAANL
ADPGALVRYVHDRKLPVHVLVLRPGKPVLVQPVGREEL

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR022877 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 30104; Mature: 30104

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGVAAILQRLAQRHDSLGIVWLGQASVALAGSGRIVLIDPFLSPHPDRLVPPMVAPEEL
CCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHH
ASVDLVLVTHEHWDHLDGPTCAAIARVAPGARFACPQPIVDQFGALGIDRERVQGMRPGQ
CCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCC
AEVFADVTVWPVAAMHGLHAADAYGFGEVDGVPRFLGYVVELAGVRLYHAGDTIAYAGLA
HHEEECCHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCEEHHHHH
ETVRALRPQVAMLPINGRDWYREQMDIVGNLDIREAAHLAADIGVELLIPLHYDMFAANL
HHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECHHHHHHCC
ADPGALVRYVHDRKLPVHVLVLRPGKPVLVQPVGREEL
CCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure
MEGVAAILQRLAQRHDSLGIVWLGQASVALAGSGRIVLIDPFLSPHPDRLVPPMVAPEEL
CCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHH
ASVDLVLVTHEHWDHLDGPTCAAIARVAPGARFACPQPIVDQFGALGIDRERVQGMRPGQ
CCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCC
AEVFADVTVWPVAAMHGLHAADAYGFGEVDGVPRFLGYVVELAGVRLYHAGDTIAYAGLA
HHEEECCHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCEEHHHHH
ETVRALRPQVAMLPINGRDWYREQMDIVGNLDIREAAHLAADIGVELLIPLHYDMFAANL
HHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEEECHHHHHHCC
ADPGALVRYVHDRKLPVHVLVLRPGKPVLVQPVGREEL
CCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]