Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635993

Identifier: 221635993

GI number: 221635993

Start: 578251

End: 579186

Strand: Reverse

Name: 221635993

Synonym: trd_A0587

Alternate gene names: NA

Gene position: 579186-578251 (Counterclockwise)

Preceding gene: 221635994

Following gene: 221635992

Centisome position: 63.11

GC content: 65.6

Gene sequence:

>936_bases
GTGGAGCGGACACGAGCGTTTCTCGAGCGGCTGGGCTTGCCACGGGGTGATCTCCATGATCTGCCGACCAGCACCAAGCG
CTTTCCCGACGGGGCGCAGTATCGGATCGAGATTCCGAGTACCGAGGGACCGCGTGTTCTCGCCGCCGTGATCGAGGAAG
CCAAGCGGCACGGTATCGTCGTCCACCGAATCTCGCAGGGAAGCGGCGTGATGCTGCTGACCGACGAGGAGATCCGCGAG
ATGGCGGCATTGGCAGCAGCCGAGGGCATGGAGGTGAGCCTCTTCGCGCGACCGAGTGCGGGGTGGGATATTGGTGCGAT
GGCCCGTACGCCGGCCGGGGCGCTGGTGAGTGCCAAGCTGCGTGGCCAGGAGCAATTGGTGCATTGCCTGGAGGACGTGC
GGCGGGCAGCAGACTTGGGTATCCGGAGCGTCCTGCTCGCTGACGAGGGAGCGCTCTGGGTGGCAAGCGAGATGCGGCGG
GCCGGTGAATTACCGCGCGATATGCAGTTCAAGGTCAGCGTGCTCATGGGGGCAGCCAATCCGGCCTCGGTCGCGTTGCT
GGTCCGCTTAGGAGCGGACACGTACAACGTCGTGACCGATCTCAGCTTGGCGCAGCTCGCCGCGATCCGAGCCGCGGTCG
ATGTGCCTCTCGACATCTACGTGGAGGTGCCGGACGACGTAGGAGGGTTCGTTCGCCACTACGAGATCGCGGAGATCGTC
CGCGTGTGCGCGCCTGTCTATCTCAAGTTCGGGCTCCGCAACGCCCCGAACATCTATCCGTCAGGGCGACATCTCGAGGA
GCTGGCTGTCCAATTGGGGCGGGAGCGAGTCCGCCGAGCAGCGATCGGACTCGCTTTGTTGCACCGGTACTATCCGGACG
CGGTGGGGTCGCGACCAGGAGCCGCTGGTCTGGCACTCCCGGTCGTGGACCGGTGA

Upstream 100 bases:

>100_bases
TACCGTGATCATCCTTGCGGTGGCGCTGGACATCATGCAGAAGCGGCGGCGGATGCGAGTGCGACGGGCCCGCCGCTGAG
TCGAAACGGGGGAGGGTCGG

Downstream 100 bases:

>100_bases
GACCGCAGCGTGGGATGGACGGTCGGTGAGCGTGCCGCGTGCGACGCGCGGCGATGGAGTTCCTGCTCTTCCAGCAGGGG
AGTGTGCTGGAGCGGTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MERTRAFLERLGLPRGDLHDLPTSTKRFPDGAQYRIEIPSTEGPRVLAAVIEEAKRHGIVVHRISQGSGVMLLTDEEIRE
MAALAAAEGMEVSLFARPSAGWDIGAMARTPAGALVSAKLRGQEQLVHCLEDVRRAADLGIRSVLLADEGALWVASEMRR
AGELPRDMQFKVSVLMGAANPASVALLVRLGADTYNVVTDLSLAQLAAIRAAVDVPLDIYVEVPDDVGGFVRHYEIAEIV
RVCAPVYLKFGLRNAPNIYPSGRHLEELAVQLGRERVRRAAIGLALLHRYYPDAVGSRPGAAGLALPVVDR

Sequences:

>Translated_311_residues
MERTRAFLERLGLPRGDLHDLPTSTKRFPDGAQYRIEIPSTEGPRVLAAVIEEAKRHGIVVHRISQGSGVMLLTDEEIRE
MAALAAAEGMEVSLFARPSAGWDIGAMARTPAGALVSAKLRGQEQLVHCLEDVRRAADLGIRSVLLADEGALWVASEMRR
AGELPRDMQFKVSVLMGAANPASVALLVRLGADTYNVVTDLSLAQLAAIRAAVDVPLDIYVEVPDDVGGFVRHYEIAEIV
RVCAPVYLKFGLRNAPNIYPSGRHLEELAVQLGRERVRRAAIGLALLHRYYPDAVGSRPGAAGLALPVVDR
>Mature_311_residues
MERTRAFLERLGLPRGDLHDLPTSTKRFPDGAQYRIEIPSTEGPRVLAAVIEEAKRHGIVVHRISQGSGVMLLTDEEIRE
MAALAAAEGMEVSLFARPSAGWDIGAMARTPAGALVSAKLRGQEQLVHCLEDVRRAADLGIRSVLLADEGALWVASEMRR
AGELPRDMQFKVSVLMGAANPASVALLVRLGADTYNVVTDLSLAQLAAIRAAVDVPLDIYVEVPDDVGGFVRHYEIAEIV
RVCAPVYLKFGLRNAPNIYPSGRHLEELAVQLGRERVRRAAIGLALLHRYYPDAVGSRPGAAGLALPVVDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33718; Mature: 33718

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTRAFLERLGLPRGDLHDLPTSTKRFPDGAQYRIEIPSTEGPRVLAAVIEEAKRHGIV
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEE
VHRISQGSGVMLLTDEEIREMAALAAAEGMEVSLFARPSAGWDIGAMARTPAGALVSAKL
EEEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHH
RGQEQLVHCLEDVRRAADLGIRSVLLADEGALWVASEMRRAGELPRDMQFKVSVLMGAAN
CCHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCC
PASVALLVRLGADTYNVVTDLSLAQLAAIRAAVDVPLDIYVEVPDDVGGFVRHYEIAEIV
CHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
RVCAPVYLKFGLRNAPNIYPSGRHLEELAVQLGRERVRRAAIGLALLHRYYPDAVGSRPG
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
AAGLALPVVDR
CCCEEECCCCC
>Mature Secondary Structure
MERTRAFLERLGLPRGDLHDLPTSTKRFPDGAQYRIEIPSTEGPRVLAAVIEEAKRHGIV
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEE
VHRISQGSGVMLLTDEEIREMAALAAAEGMEVSLFARPSAGWDIGAMARTPAGALVSAKL
EEEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHHH
RGQEQLVHCLEDVRRAADLGIRSVLLADEGALWVASEMRRAGELPRDMQFKVSVLMGAAN
CCHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCC
PASVALLVRLGADTYNVVTDLSLAQLAAIRAAVDVPLDIYVEVPDDVGGFVRHYEIAEIV
CHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
RVCAPVYLKFGLRNAPNIYPSGRHLEELAVQLGRERVRRAAIGLALLHRYYPDAVGSRPG
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
AAGLALPVVDR
CCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA