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The map label for this gene is yqeB [H]

Identifier: 221635969

GI number: 221635969

Start: 555700

End: 556806

Strand: Reverse

Name: yqeB [H]

Synonym: trd_A0563

Alternate gene names: 221635969

Gene position: 556806-555700 (Counterclockwise)

Preceding gene: 221635970

Following gene: 221635968

Centisome position: 60.67

GC content: 65.22

Gene sequence:

>1107_bases
GTGTGGCGGAGTGAGCGCAGCGCAGCGATCCGGTCCGTCGCGGGGGCTGGATCGCTGCGCCCTTTCTCGATGTCCGACGA
GCGACGAGCGAGCGAGATGACGAAGGCAAGTCATGCCGAAGCAACACTGTCACGTGACCTCTTCGCGCTGGCGGCTGATC
TCCGCCAGCGCGGGGTACCTTTCGTTCTCGCAACGGTGATCTGGACCCAGAGTCCGACCTCAGCGAAGCCGGGGGCGAAA
GGTATCGTGACCGCAGACGGCGCACTCTTCGGCTGGGTCGGTGGGAGTTGTGCTCAGCCCGCCGTCATGCGAGAGGCGAT
GGCTGCCTTGCACGATGGACGAGCGCGGATCCTGCGGATCGATCCTGTTGGCTCTCCCGACCAACCGCCCCGGCCAGGCG
TCATTGTCGCTCCCATGACGTGTCACAGCGAAGGAGCACTCGAGATTTTCTTGGAACCGTTTCTCCCGGCACCGCAACTC
TTGATCTACGGCGAGAGTCCGGTCGCTGACGCGCTTCTCCGCTTGGGCAAGGCGATGGGCTACTGGGTGGTCGCCCTGCG
CCCTGGGGCGAGCGGAGCGCCGGCTGAGGTCGATGAATGGCTGGATAGCCTGGATCCGGGCGATCGACCGCGAAGGCGGC
CGACCGTCGCTGTCGTCGCCAGCCTCGGTGCGTACGACGAGGACGCGATCGAAGCCGCGCTGCGTGCCGGTGTCACCTTC
GTCGAACTGGTAGCCAGTCGGAAGCGATTCCGAGCGATCCGCGAGACCTTGGCACGATCGCTGCCGGAAACCTTGCTGGA
GCGGGTCAAAGCGCCGGCCGGACTCGACATCCAGGCCACGAGCCCGGAGGAAATCGCGGTCAGCATTCTGGCTGAACTCA
TCGCCGCCAAGTCAGTTTGGCGGAACACCTGGCGTCCAGAAGAAGCTGGCGCACGCACCGAGCTTCCCACCCGCGAGGCG
ATCGATCCGGTCTGTGGGATGACGGTGAACACGGAGAGCGCTCGGCATGTCGTCGACTACCGAGGACAGCGGTACTTCTT
CTGCTGCCCAGCCTGTCGCCGCCTGTTCGAGGCGGATCCAGAGGCCTACCTGAGCACAACGCGATAG

Upstream 100 bases:

>100_bases
ATCGTCAACGCCGTGGTCGATGCACTGAGCCATCTCGGGGTGCGCCATATCGACATCCCGATCACGCCAGCCAAGCTGTA
CCGGATTCTCCAAGAGAAGG

Downstream 100 bases:

>100_bases
ATCGAGTTCCCAGAACGGCTCAGCGGCGAGCGAGGGAGCTGGCAGGCCTCGCCGTGCCGTCGTCTCGGCGAGCGCAGGCA
AGAGGTCGGGGCGGTCTGGA

Product: xanthine dehydrogenase accessory factor, putative subfamily, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MWRSERSAAIRSVAGAGSLRPFSMSDERRASEMTKASHAEATLSRDLFALAADLRQRGVPFVLATVIWTQSPTSAKPGAK
GIVTADGALFGWVGGSCAQPAVMREAMAALHDGRARILRIDPVGSPDQPPRPGVIVAPMTCHSEGALEIFLEPFLPAPQL
LIYGESPVADALLRLGKAMGYWVVALRPGASGAPAEVDEWLDSLDPGDRPRRRPTVAVVASLGAYDEDAIEAALRAGVTF
VELVASRKRFRAIRETLARSLPETLLERVKAPAGLDIQATSPEEIAVSILAELIAAKSVWRNTWRPEEAGARTELPTREA
IDPVCGMTVNTESARHVVDYRGQRYFFCCPACRRLFEADPEAYLSTTR

Sequences:

>Translated_368_residues
MWRSERSAAIRSVAGAGSLRPFSMSDERRASEMTKASHAEATLSRDLFALAADLRQRGVPFVLATVIWTQSPTSAKPGAK
GIVTADGALFGWVGGSCAQPAVMREAMAALHDGRARILRIDPVGSPDQPPRPGVIVAPMTCHSEGALEIFLEPFLPAPQL
LIYGESPVADALLRLGKAMGYWVVALRPGASGAPAEVDEWLDSLDPGDRPRRRPTVAVVASLGAYDEDAIEAALRAGVTF
VELVASRKRFRAIRETLARSLPETLLERVKAPAGLDIQATSPEEIAVSILAELIAAKSVWRNTWRPEEAGARTELPTREA
IDPVCGMTVNTESARHVVDYRGQRYFFCCPACRRLFEADPEAYLSTTR
>Mature_368_residues
MWRSERSAAIRSVAGAGSLRPFSMSDERRASEMTKASHAEATLSRDLFALAADLRQRGVPFVLATVIWTQSPTSAKPGAK
GIVTADGALFGWVGGSCAQPAVMREAMAALHDGRARILRIDPVGSPDQPPRPGVIVAPMTCHSEGALEIFLEPFLPAPQL
LIYGESPVADALLRLGKAMGYWVVALRPGASGAPAEVDEWLDSLDPGDRPRRRPTVAVVASLGAYDEDAIEAALRAGVTF
VELVASRKRFRAIRETLARSLPETLLERVKAPAGLDIQATSPEEIAVSILAELIAAKSVWRNTWRPEEAGARTELPTREA
IDPVCGMTVNTESARHVVDYRGQRYFFCCPACRRLFEADPEAYLSTTR

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=272, Percent_Identity=23.8970588235294, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 39828; Mature: 39828

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRSERSAAIRSVAGAGSLRPFSMSDERRASEMTKASHAEATLSRDLFALAADLRQRGVP
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVLATVIWTQSPTSAKPGAKGIVTADGALFGWVGGSCAQPAVMREAMAALHDGRARILRI
EEEEHHHHCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEE
DPVGSPDQPPRPGVIVAPMTCHSEGALEIFLEPFLPAPQLLIYGESPVADALLRLGKAMG
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCC
YWVVALRPGASGAPAEVDEWLDSLDPGDRPRRRPTVAVVASLGAYDEDAIEAALRAGVTF
EEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEHHCCCCHHHHHHHHHHCHHH
VELVASRKRFRAIRETLARSLPETLLERVKAPAGLDIQATSPEEIAVSILAELIAAKSVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
RNTWRPEEAGARTELPTREAIDPVCGMTVNTESARHVVDYRGQRYFFCCPACRRLFEADP
HCCCCCHHCCCCCCCCCHHHCCCHHCCEECCHHHHHHHHCCCCEEEEECHHHHHHHHCCC
EAYLSTTR
HHHHCCCC
>Mature Secondary Structure
MWRSERSAAIRSVAGAGSLRPFSMSDERRASEMTKASHAEATLSRDLFALAADLRQRGVP
CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVLATVIWTQSPTSAKPGAKGIVTADGALFGWVGGSCAQPAVMREAMAALHDGRARILRI
EEEEHHHHCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEE
DPVGSPDQPPRPGVIVAPMTCHSEGALEIFLEPFLPAPQLLIYGESPVADALLRLGKAMG
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHCC
YWVVALRPGASGAPAEVDEWLDSLDPGDRPRRRPTVAVVASLGAYDEDAIEAALRAGVTF
EEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEHHCCCCHHHHHHHHHHCHHH
VELVASRKRFRAIRETLARSLPETLLERVKAPAGLDIQATSPEEIAVSILAELIAAKSVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
RNTWRPEEAGARTELPTREAIDPVCGMTVNTESARHVVDYRGQRYFFCCPACRRLFEADP
HCCCCCHHCCCCCCCCCHHHCCCHHCCEECCHHHHHHHHCCCCEEEEECHHHHHHHHCCC
EAYLSTTR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]