Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635693

Identifier: 221635693

GI number: 221635693

Start: 274365

End: 275192

Strand: Reverse

Name: 221635693

Synonym: trd_A0287

Alternate gene names: NA

Gene position: 275192-274365 (Counterclockwise)

Preceding gene: 221635694

Following gene: 221635692

Centisome position: 29.99

GC content: 69.32

Gene sequence:

>828_bases
ATGCCACCACACCTGACGCGCCGCGCAATGCTCGCGACGAGCCTCACCGTCGCTGCTGGCGCTGTCGCCTTCGGCTTCTG
GCAGGCCCTCCGTTCGCGTGCCGAGCTGGAGCAGCCTCCGGCTCCCCCGCTGCTCCTTCCGGAAGACCAGGCTGCGCGCG
CCCGGGCGGTCGCCCAGCAGCACCCGACCGTGCAAGCGCTCGTCGGCTCCGGCGCCCGACCCGACTCGCCGGTCCAGGTC
AATCCCGTCACTGGTCCGGACGGCCGGATCGTCGCCGCTGGCGTCTGGTTCCCCTTCGACGCACCGCGAACGGTCCGCGC
GACCTGGGTGCACCCGGCGGACTGGGAAGTCAACTGGTCACCGACGCGCTTCGTGCAGGCGACCTATACGGTGGAGGAGG
CGTGGGGCATCCTCGTCTGGGTCGATCTGGCAAGCGAGCAGGTGGTGCGGCTGGAAGCGAGCGGTCCGTACGCCCGCGTC
GCACCGGACGAAGACCCGTTCGTCCTGCGGGGCGAACTCCGCGACCGCGCGATCCAGCTCGCCCTCGACGCACCGTGGCT
CGCGCCGCTCCTCACCCGAGCCGAGCCGTCCGTCATGGAGCACTTGCCTGGGATCCATGACCGCCAGGGTGATCTCATCG
GTGCGGTCGTCGGCTTGCAGTTCTCCGAACCGCTCGCGGTCTCCGGCACGTTTCCGGTCGTCGTGAAAGACGAGCGCGCA
GACTGGGACGACGCCGAGATTCCTGAGCAGACGATCGAGCAGAAGGTATCGCTCGTCGTCGTGGTCGTCTCGTTCCGTGA
CGACCGCGCACTCGGACTGTGGTATTGA

Upstream 100 bases:

>100_bases
GACCGTGACAAAACTGTCATGCGTTCAGCGCTTGACAACCCGCCCCCCATTCTATACTGAGGTCAGATGACGTCCTTTCC
GAAGTTCGAGGAGGTGGACG

Downstream 100 bases:

>100_bases
GGTTGATGCTCGACGGCGCTGCGGAACGGAGGCACTTCCCGGTCAGCCTCCGCGTCCTCGCTCGACTCATCGACGCCTCC
GGAACGCGCCCTCTGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MPPHLTRRAMLATSLTVAAGAVAFGFWQALRSRAELEQPPAPPLLLPEDQAARARAVAQQHPTVQALVGSGARPDSPVQV
NPVTGPDGRIVAAGVWFPFDAPRTVRATWVHPADWEVNWSPTRFVQATYTVEEAWGILVWVDLASEQVVRLEASGPYARV
APDEDPFVLRGELRDRAIQLALDAPWLAPLLTRAEPSVMEHLPGIHDRQGDLIGAVVGLQFSEPLAVSGTFPVVVKDERA
DWDDAEIPEQTIEQKVSLVVVVVSFRDDRALGLWY

Sequences:

>Translated_275_residues
MPPHLTRRAMLATSLTVAAGAVAFGFWQALRSRAELEQPPAPPLLLPEDQAARARAVAQQHPTVQALVGSGARPDSPVQV
NPVTGPDGRIVAAGVWFPFDAPRTVRATWVHPADWEVNWSPTRFVQATYTVEEAWGILVWVDLASEQVVRLEASGPYARV
APDEDPFVLRGELRDRAIQLALDAPWLAPLLTRAEPSVMEHLPGIHDRQGDLIGAVVGLQFSEPLAVSGTFPVVVKDERA
DWDDAEIPEQTIEQKVSLVVVVVSFRDDRALGLWY
>Mature_274_residues
PPHLTRRAMLATSLTVAAGAVAFGFWQALRSRAELEQPPAPPLLLPEDQAARARAVAQQHPTVQALVGSGARPDSPVQVN
PVTGPDGRIVAAGVWFPFDAPRTVRATWVHPADWEVNWSPTRFVQATYTVEEAWGILVWVDLASEQVVRLEASGPYARVA
PDEDPFVLRGELRDRAIQLALDAPWLAPLLTRAEPSVMEHLPGIHDRQGDLIGAVVGLQFSEPLAVSGTFPVVVKDERAD
WDDAEIPEQTIEQKVSLVVVVVSFRDDRALGLWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30130; Mature: 29999

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPHLTRRAMLATSLTVAAGAVAFGFWQALRSRAELEQPPAPPLLLPEDQAARARAVAQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHH
HPTVQALVGSGARPDSPVQVNPVTGPDGRIVAAGVWFPFDAPRTVRATWVHPADWEVNWS
CCCHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEECCC
PTRFVQATYTVEEAWGILVWVDLASEQVVRLEASGPYARVAPDEDPFVLRGELRDRAIQL
CCEEEEEEEEEHHCCEEEEEEEECCCEEEEEECCCCEEECCCCCCCEEEECCCCCEEEEE
ALDAPWLAPLLTRAEPSVMEHLPGIHDRQGDLIGAVVGLQFSEPLAVSGTFPVVVKDERA
EECCCHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEECCCEEEEEECCCC
DWDDAEIPEQTIEQKVSLVVVVVSFRDDRALGLWY
CCCCCCCCHHHHHHHEEEEEEEEEECCCCEEECCC
>Mature Secondary Structure 
PPHLTRRAMLATSLTVAAGAVAFGFWQALRSRAELEQPPAPPLLLPEDQAARARAVAQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHH
HPTVQALVGSGARPDSPVQVNPVTGPDGRIVAAGVWFPFDAPRTVRATWVHPADWEVNWS
CCCHHHHHCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEECCC
PTRFVQATYTVEEAWGILVWVDLASEQVVRLEASGPYARVAPDEDPFVLRGELRDRAIQL
CCEEEEEEEEEHHCCEEEEEEEECCCEEEEEECCCCEEECCCCCCCEEEECCCCCEEEEE
ALDAPWLAPLLTRAEPSVMEHLPGIHDRQGDLIGAVVGLQFSEPLAVSGTFPVVVKDERA
EECCCHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEECCCEEEEEECCCC
DWDDAEIPEQTIEQKVSLVVVVVSFRDDRALGLWY
CCCCCCCCHHHHHHHEEEEEEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA