Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635613

Identifier: 221635613

GI number: 221635613

Start: 190089

End: 190781

Strand: Reverse

Name: 221635613

Synonym: trd_A0207

Alternate gene names: NA

Gene position: 190781-190089 (Counterclockwise)

Preceding gene: 221635630

Following gene: 221635612

Centisome position: 20.79

GC content: 71.72

Gene sequence:

>693_bases
GTGATCCAAAGGCCGCTCACGCAGCCACCTAAAGGGTTCACGGTCTGGCAGACAGCCGACCTGGGCGTCCCCGACCGCAC
CGGGCGGCTCGCCTGGCACCGCACCCGCGTCGAGGACTTCACGCCCGATGGCCAGCGTGTCGTGGTCGGCTGGCCGATGG
TCCAGCTGGCCTACGTCTTCGTCCACCGCGGCGACCCCGTCTACCTCGGTGCCACGGTCCCGGACGACGCCCTCTACGTG
GTCCCCTGCGAGGTCGTCGCGACGGTGCTCGAGCCGCAGGCACGCCTGGTCCTCGCACCCGTGGGGAACTGGGAGCGGAT
GCAGCGTCGCGAGCACTGCCGCGTCGCCGTGACCATCGCACCGGAAGAAATCCTGCTCCTCCCCGCCGAAGGGGAACCGC
AGCCCCTGCGTGGCCTCATCGTCGACCTCAGTGCCGGCGGTGTCCGCCTCCGCCTGAGCCAGCCGCTCCGTCCGGGTGAC
CGGCTGGCGCTCCGCTTCGCGCTCCCCAACGCGACCCAGCCGATCGGCGCGGTTGCCGTCGTGCGGCGGGTGACGCCGCT
CGAGCACGCCGACCCACCACGCTGGGATCACGGCTGCCAGTTCGAGCGGCTGGATCGCCGTACCGAGGATGTCATCGTCC
GCTTCGTGTTCCAGCGCCAGCGCGAGTGCGCCAGGCAGACCCGCGCCGGCTAG

Upstream 100 bases:

>100_bases
CCGAGCGACGACTGGCTGGCCGGCCCGATCCACGCTACACTCGGCTCCAGCTGCGAGACGCCCCTGCCGATACCTATGAC
CAGGAGCCGAGGGGGACAGG

Downstream 100 bases:

>100_bases
CCGAGCCCCGGCGCAGCGACCAGCCCGTTCCGGCCACCGGCACTCTCGCTGCCCTCCGCACACCACCGGCGGGTCGGGCA
CCGCCTGACCCCTACCGGAC

Product: type IV pilus assembly protein PilZ

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein PilZ

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIQRPLTQPPKGFTVWQTADLGVPDRTGRLAWHRTRVEDFTPDGQRVVVGWPMVQLAYVFVHRGDPVYLGATVPDDALYV
VPCEVVATVLEPQARLVLAPVGNWERMQRREHCRVAVTIAPEEILLLPAEGEPQPLRGLIVDLSAGGVRLRLSQPLRPGD
RLALRFALPNATQPIGAVAVVRRVTPLEHADPPRWDHGCQFERLDRRTEDVIVRFVFQRQRECARQTRAG

Sequences:

>Translated_230_residues
MIQRPLTQPPKGFTVWQTADLGVPDRTGRLAWHRTRVEDFTPDGQRVVVGWPMVQLAYVFVHRGDPVYLGATVPDDALYV
VPCEVVATVLEPQARLVLAPVGNWERMQRREHCRVAVTIAPEEILLLPAEGEPQPLRGLIVDLSAGGVRLRLSQPLRPGD
RLALRFALPNATQPIGAVAVVRRVTPLEHADPPRWDHGCQFERLDRRTEDVIVRFVFQRQRECARQTRAG
>Mature_230_residues
MIQRPLTQPPKGFTVWQTADLGVPDRTGRLAWHRTRVEDFTPDGQRVVVGWPMVQLAYVFVHRGDPVYLGATVPDDALYV
VPCEVVATVLEPQARLVLAPVGNWERMQRREHCRVAVTIAPEEILLLPAEGEPQPLRGLIVDLSAGGVRLRLSQPLRPGD
RLALRFALPNATQPIGAVAVVRRVTPLEHADPPRWDHGCQFERLDRRTEDVIVRFVFQRQRECARQTRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25931; Mature: 25931

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRPLTQPPKGFTVWQTADLGVPDRTGRLAWHRTRVEDFTPDGQRVVVGWPMVQLAYVF
CCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCHHHEEEEE
VHRGDPVYLGATVPDDALYVVPCEVVATVLEPQARLVLAPVGNWERMQRREHCRVAVTIA
EECCCEEEEECCCCCCCEEEEEHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCEEEEEEC
PEEILLLPAEGEPQPLRGLIVDLSAGGVRLRLSQPLRPGDRLALRFALPNATQPIGAVAV
CCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHH
VRRVTPLEHADPPRWDHGCQFERLDRRTEDVIVRFVFQRQRECARQTRAG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQRPLTQPPKGFTVWQTADLGVPDRTGRLAWHRTRVEDFTPDGQRVVVGWPMVQLAYVF
CCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCHHHEEEEE
VHRGDPVYLGATVPDDALYVVPCEVVATVLEPQARLVLAPVGNWERMQRREHCRVAVTIA
EECCCEEEEECCCCCCCEEEEEHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCEEEEEEC
PEEILLLPAEGEPQPLRGLIVDLSAGGVRLRLSQPLRPGDRLALRFALPNATQPIGAVAV
CCEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHH
VRRVTPLEHADPPRWDHGCQFERLDRRTEDVIVRFVFQRQRECARQTRAG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA