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The map label for this gene is 221635488

Identifier: 221635488

GI number: 221635488

Start: 69986

End: 71413

Strand: Reverse

Name: 221635488

Synonym: trd_A0082

Alternate gene names: NA

Gene position: 71413-69986 (Counterclockwise)

Preceding gene: 221635489

Following gene: 221635487

Centisome position: 7.78

GC content: 62.46

Gene sequence:

>1428_bases
ATGAACGGACAGCCTGCACGTTTCAGTCGGCGCACTTTGCTCCGTCGTGCCGGATTCGTCGGACTCGCGGCGACAGCGTC
AGCTCTCTTGGCTGCCTGTGCCGGCCAGCAAGCGACTCCAACGCCAGCGCCACCGGCAGCCACCCCACCGCCCGCTCCCG
CTCCGTCACCGACTCCGCCTGCCCCGACGCCAGCTGCCGCTGCCTCCCCGGCGGTGACGGTCGGCCCGGCTGCTGGCGAG
ATCGTCATCGGCATCCTGGCGACCCTGGAGGGGGCCTTCGCGCTCTACGGTGAGGAAGCGGTGCGCGGTGTCGAGTTGGC
GGTGGCCGAGTTCGGGGGTGAGATCGCCGGTAAGAAGATCCGCCTCGTGAAAGAGAGCACCGATGCTACCCCGCAAGTAG
CGCGCGAGAAAGCCCGCAAGCTGATCGAGCAGGACAAGGTGGACTGCATCGTCGGACCGCTTTCGGGTGACGAGGGTTTG
GCGCTCCGCGACTACGCAAAGACCATCCCCGACAAGACGATCGTCAATGGCACGTCCGCCGCACAGGACACGACGCTCCG
TGATCCCGCTCCCAACTTCTTCCGCTTCTCGACCGATGGGGTGCAATGGATGGCCGGGCTCGGCACCTACTGCTACGAGG
TCAAGGGATACCGTCGCGTGGCGACATTGGGTGAGGACTACTCCTATCCCTACAGTCAGGTGGCTGGTTTCCTGCTGGAG
TTTTGCCGGTTGGGTGGTGACTGCGTCGCCCAGTTCTGGGTGCCGATCGGTACCAAAGACTACAGCTCAGTCATCAGCTC
GATGCCGAGCGATATCGATGCCATCTACGTCATCCTGGGTGGATCCGATGCGGTGAATTTCCTCAAAGCGTACTCCGAGT
TCGGTGGCAAGGCAGCGCTGATCGGTGGCAGTTCGACGATCGATCAGAACGTTTTGGAGACCAAGGGGGCACTCCGATCG
CGCGTCATCGGTATCCCTGGTGCGATGCCGGTCGCAGCGGACAATCCCGATCCCGCCTGGAAGGCCTGGGTCGAGCAATA
CCGGAAGCAGTTCCCGCAGGGACTCAGCACCCCATCTCTCTTCTGCTGGGGCTATTACGTCAATGCGAAGGGACTCCTGC
TCGGCTTGAAGGCGGTCAATGGCGACCTCAGTGACGGACAGAAGAAGCTGCAAGCGGCACTCGCCAAGGTCGAGTTCGAT
GGACCGACCGGGCACATCAAGCTGGACAAGAACCGGCAGGCGATCGCCAACAACTTCGTGACCGAGGTGGCCGAGGGCCC
GGACGGCAACTTGTACAATAAGCTCGTCAAGGTCGTCGAGGGAGTGAACCAAACGCTCGGCCTTCCGGAGGACAAATATC
TTTCTCTCGGCTCGTTCACGCGCGACAATCCGACGTGCGAGAAGATCAAGAAGACCTTCGGGTCCTGA

Upstream 100 bases:

>100_bases
TTCGCCTCGGCCGAACGGGCTGAGATGCAGTGAAGGGAGGTCAGCGCTCGCTTCGACGTCAGTCGGTTCAGTGGTCAGTG
TCAGGAGAGGAGGAGCAGCG

Downstream 100 bases:

>100_bases
GCGATGGTGGCGATCGAGCTGCACCGTCCGCACACAGCGGCTCATGCCCTGGAACTCCAGGGCGTGAGTCGCCGTTTCGG
CGGTCTCGTCGCGGTGCGCG

Product: ABC-type branched-chain amino acid transport systems periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MNGQPARFSRRTLLRRAGFVGLAATASALLAACAGQQATPTPAPPAATPPPAPAPSPTPPAPTPAAAASPAVTVGPAAGE
IVIGILATLEGAFALYGEEAVRGVELAVAEFGGEIAGKKIRLVKESTDATPQVAREKARKLIEQDKVDCIVGPLSGDEGL
ALRDYAKTIPDKTIVNGTSAAQDTTLRDPAPNFFRFSTDGVQWMAGLGTYCYEVKGYRRVATLGEDYSYPYSQVAGFLLE
FCRLGGDCVAQFWVPIGTKDYSSVISSMPSDIDAIYVILGGSDAVNFLKAYSEFGGKAALIGGSSTIDQNVLETKGALRS
RVIGIPGAMPVAADNPDPAWKAWVEQYRKQFPQGLSTPSLFCWGYYVNAKGLLLGLKAVNGDLSDGQKKLQAALAKVEFD
GPTGHIKLDKNRQAIANNFVTEVAEGPDGNLYNKLVKVVEGVNQTLGLPEDKYLSLGSFTRDNPTCEKIKKTFGS

Sequences:

>Translated_475_residues
MNGQPARFSRRTLLRRAGFVGLAATASALLAACAGQQATPTPAPPAATPPPAPAPSPTPPAPTPAAAASPAVTVGPAAGE
IVIGILATLEGAFALYGEEAVRGVELAVAEFGGEIAGKKIRLVKESTDATPQVAREKARKLIEQDKVDCIVGPLSGDEGL
ALRDYAKTIPDKTIVNGTSAAQDTTLRDPAPNFFRFSTDGVQWMAGLGTYCYEVKGYRRVATLGEDYSYPYSQVAGFLLE
FCRLGGDCVAQFWVPIGTKDYSSVISSMPSDIDAIYVILGGSDAVNFLKAYSEFGGKAALIGGSSTIDQNVLETKGALRS
RVIGIPGAMPVAADNPDPAWKAWVEQYRKQFPQGLSTPSLFCWGYYVNAKGLLLGLKAVNGDLSDGQKKLQAALAKVEFD
GPTGHIKLDKNRQAIANNFVTEVAEGPDGNLYNKLVKVVEGVNQTLGLPEDKYLSLGSFTRDNPTCEKIKKTFGS
>Mature_475_residues
MNGQPARFSRRTLLRRAGFVGLAATASALLAACAGQQATPTPAPPAATPPPAPAPSPTPPAPTPAAAASPAVTVGPAAGE
IVIGILATLEGAFALYGEEAVRGVELAVAEFGGEIAGKKIRLVKESTDATPQVAREKARKLIEQDKVDCIVGPLSGDEGL
ALRDYAKTIPDKTIVNGTSAAQDTTLRDPAPNFFRFSTDGVQWMAGLGTYCYEVKGYRRVATLGEDYSYPYSQVAGFLLE
FCRLGGDCVAQFWVPIGTKDYSSVISSMPSDIDAIYVILGGSDAVNFLKAYSEFGGKAALIGGSSTIDQNVLETKGALRS
RVIGIPGAMPVAADNPDPAWKAWVEQYRKQFPQGLSTPSLFCWGYYVNAKGLLLGLKAVNGDLSDGQKKLQAALAKVEFD
GPTGHIKLDKNRQAIANNFVTEVAEGPDGNLYNKLVKVVEGVNQTLGLPEDKYLSLGSFTRDNPTCEKIKKTFGS

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 50155; Mature: 50155

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQPARFSRRTLLRRAGFVGLAATASALLAACAGQQATPTPAPPAATPPPAPAPSPTPP
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
APTPAAAASPAVTVGPAAGEIVIGILATLEGAFALYGEEAVRGVELAVAEFGGEIAGKKI
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEE
RLVKESTDATPQVAREKARKLIEQDKVDCIVGPLSGDEGLALRDYAKTIPDKTIVNGTSA
EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCEECCCCC
AQDTTLRDPAPNFFRFSTDGVQWMAGLGTYCYEVKGYRRVATLGEDYSYPYSQVAGFLLE
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHH
FCRLGGDCVAQFWVPIGTKDYSSVISSMPSDIDAIYVILGGSDAVNFLKAYSEFGGKAAL
HHHCCCCEEHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEE
IGGSSTIDQNVLETKGALRSRVIGIPGAMPVAADNPDPAWKAWVEQYRKQFPQGLSTPSL
ECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
FCWGYYVNAKGLLLGLKAVNGDLSDGQKKLQAALAKVEFDGPTGHIKLDKNRQAIANNFV
EEEEEEECCCEEEEEEEHHCCCCCHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHH
TEVAEGPDGNLYNKLVKVVEGVNQTLGLPEDKYLSLGSFTRDNPTCEKIKKTFGS
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCEECCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNGQPARFSRRTLLRRAGFVGLAATASALLAACAGQQATPTPAPPAATPPPAPAPSPTPP
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
APTPAAAASPAVTVGPAAGEIVIGILATLEGAFALYGEEAVRGVELAVAEFGGEIAGKKI
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEE
RLVKESTDATPQVAREKARKLIEQDKVDCIVGPLSGDEGLALRDYAKTIPDKTIVNGTSA
EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCCEECCCCC
AQDTTLRDPAPNFFRFSTDGVQWMAGLGTYCYEVKGYRRVATLGEDYSYPYSQVAGFLLE
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHH
FCRLGGDCVAQFWVPIGTKDYSSVISSMPSDIDAIYVILGGSDAVNFLKAYSEFGGKAAL
HHHCCCCEEHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEE
IGGSSTIDQNVLETKGALRSRVIGIPGAMPVAADNPDPAWKAWVEQYRKQFPQGLSTPSL
ECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
FCWGYYVNAKGLLLGLKAVNGDLSDGQKKLQAALAKVEFDGPTGHIKLDKNRQAIANNFV
EEEEEEECCCEEEEEEEHHCCCCCHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHH
TEVAEGPDGNLYNKLVKVVEGVNQTLGLPEDKYLSLGSFTRDNPTCEKIKKTFGS
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCEECCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA