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The map label for this gene is 221635485

Identifier: 221635485

GI number: 221635485

Start: 67225

End: 68463

Strand: Reverse

Name: 221635485

Synonym: trd_A0079

Alternate gene names: NA

Gene position: 68463-67225 (Counterclockwise)

Preceding gene: 221635486

Following gene: 221635484

Centisome position: 7.46

GC content: 65.62

Gene sequence:

>1239_bases
ATGCCGACCGTTGTCCTGATCGGAACGCTCGATACGAAGGGAGTGGAGTACGAGTTTCTCCGCCAGCGCCTGCGCGAACG
CGGCTGTGAGGTTCTCCTGATCGATGCCGGCGTGCTCGGTGCGCCGCAGGCGGCACCCGATATCTCTCGCGAAGAGGTCG
CCCGCGCAGCTGGCGCCGATGTCGCTGAGCTCGCAGCGCGCGGTGACCGCGGGGCAGCTATCGCGACGATGGCGCGAGGC
GCGACCGCCATCGTGCTCGACTTGTATCGGGCCGGCCGTCTGCACGGTATCCTCGCCCTCGGCGGCTCCGGCGGCTCCTC
CCTGGCAACGACCGCGATGCGGGCCCTTCCGATCGGTGTCCCCAAACTCATGGTCTCCACGCTCGCCTCGGGCGATACGC
GACCTTATGTTGGCGCGAGCGATATCGCCATGCTCTATCCGGTAGTCGACATCGCCGGCATCAACCGGATCAGCGAGCGG
ATCCTCACCAATGCCGCGGCTGCGATCGCTGGCATGGCCCAGGCCTACGAGACTTTCCGCCCCAGTGCTCCGAGCAAGCC
GCTCATCGGGGCGACGATGTTCGGCGTGACGACGCCTTGTGTGACGGAGGCGCGCAAGGAACTGGAAGGGCGTGGCTACG
AGGTCCTGGTCTTCCATGCGACCGGGACCGGTGGTCAAGCGATGGAGAACCTCGTCAAGGGTGGTTTCCTCGCCGGCGTC
TTGGACATCACCACGACCGAACTGGCCGACGAACTGGTCGGCGGTGTGCTTTCCGCTGGACCGGAGCGCCTCGAGGCGGC
CGGGGCGATGGGGATCCCGCAGGTGGTTTCGCTGGGCGCCTTGGACATGGTGAATTTCGGGCCGCTCGAGACGGTGCCGG
AGCGCTTCCGCCACCGTCGGCTGTACCAGCACAACCCGACCGTCACGCTCATGCGTACGACGCGAGAGGAATGTGCCGAG
CTCGGCCGCATCATCGCGCGCAAGCTCAATGCTGCCAAGGGACCGGTTGCTGTCTTCATCCCCAAGCGTGGCTTCTCGGC
CATCGACGTCGAGGGGAAACCGTTTTACGATCCGGAAGCTGATCAGGCACTCATCGAGGCGCTCGAAGCAAATCTCGCTC
CACATATCGAAGTCCACGAGTGGGACACGGATATCAACGATCCGGCCTTCGCCCGGGCAATGGCTGCCCGACTCGATGAG
CTGATCCGAGCTCAGCAGCCAGCCGAGGCGGCGAGCTGA

Upstream 100 bases:

>100_bases
CGTCTGGGAGACGAGTGCAGCGGAACTCTTGGGTGATCCGGAGCGTCAACAGCGCTATCTCGGTGTGAGCGCCTGGCAGG
CTGCTTGAAGGGAGGGCCCG

Downstream 100 bases:

>100_bases
AGCAGGAAAGGAGGGTGAGATGAGCTGGCGTCCGATGACACGCGCCGAAGCACTCGCCAAGCTCCGGCAGACCCTGGCCG
AGGGGCGACCGATCATCGGA

Product: domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPTVVLIGTLDTKGVEYEFLRQRLRERGCEVLLIDAGVLGAPQAAPDISREEVARAAGADVAELAARGDRGAAIATMARG
ATAIVLDLYRAGRLHGILALGGSGGSSLATTAMRALPIGVPKLMVSTLASGDTRPYVGASDIAMLYPVVDIAGINRISER
ILTNAAAAIAGMAQAYETFRPSAPSKPLIGATMFGVTTPCVTEARKELEGRGYEVLVFHATGTGGQAMENLVKGGFLAGV
LDITTTELADELVGGVLSAGPERLEAAGAMGIPQVVSLGALDMVNFGPLETVPERFRHRRLYQHNPTVTLMRTTREECAE
LGRIIARKLNAAKGPVAVFIPKRGFSAIDVEGKPFYDPEADQALIEALEANLAPHIEVHEWDTDINDPAFARAMAARLDE
LIRAQQPAEAAS

Sequences:

>Translated_412_residues
MPTVVLIGTLDTKGVEYEFLRQRLRERGCEVLLIDAGVLGAPQAAPDISREEVARAAGADVAELAARGDRGAAIATMARG
ATAIVLDLYRAGRLHGILALGGSGGSSLATTAMRALPIGVPKLMVSTLASGDTRPYVGASDIAMLYPVVDIAGINRISER
ILTNAAAAIAGMAQAYETFRPSAPSKPLIGATMFGVTTPCVTEARKELEGRGYEVLVFHATGTGGQAMENLVKGGFLAGV
LDITTTELADELVGGVLSAGPERLEAAGAMGIPQVVSLGALDMVNFGPLETVPERFRHRRLYQHNPTVTLMRTTREECAE
LGRIIARKLNAAKGPVAVFIPKRGFSAIDVEGKPFYDPEADQALIEALEANLAPHIEVHEWDTDINDPAFARAMAARLDE
LIRAQQPAEAAS
>Mature_411_residues
PTVVLIGTLDTKGVEYEFLRQRLRERGCEVLLIDAGVLGAPQAAPDISREEVARAAGADVAELAARGDRGAAIATMARGA
TAIVLDLYRAGRLHGILALGGSGGSSLATTAMRALPIGVPKLMVSTLASGDTRPYVGASDIAMLYPVVDIAGINRISERI
LTNAAAAIAGMAQAYETFRPSAPSKPLIGATMFGVTTPCVTEARKELEGRGYEVLVFHATGTGGQAMENLVKGGFLAGVL
DITTTELADELVGGVLSAGPERLEAAGAMGIPQVVSLGALDMVNFGPLETVPERFRHRRLYQHNPTVTLMRTTREECAEL
GRIIARKLNAAKGPVAVFIPKRGFSAIDVEGKPFYDPEADQALIEALEANLAPHIEVHEWDTDINDPAFARAMAARLDEL
IRAQQPAEAAS

Specific function: Unknown

COG id: COG5441

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0261 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008322 [H]

Pfam domain/function: PF06792 UPF0261 [H]

EC number: NA

Molecular weight: Translated: 43456; Mature: 43325

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVVLIGTLDTKGVEYEFLRQRLRERGCEVLLIDAGVLGAPQAAPDISREEVARAAGAD
CCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
VAELAARGDRGAAIATMARGATAIVLDLYRAGRLHGILALGGSGGSSLATTAMRALPIGV
HHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCH
PKLMVSTLASGDTRPYVGASDIAMLYPVVDIAGINRISERILTNAAAAIAGMAQAYETFR
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSAPSKPLIGATMFGVTTPCVTEARKELEGRGYEVLVFHATGTGGQAMENLVKGGFLAGV
CCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHH
LDITTTELADELVGGVLSAGPERLEAAGAMGIPQVVSLGALDMVNFGPLETVPERFRHRR
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCHHCCCCCCHHHHHHHHHHHH
LYQHNPTVTLMRTTREECAELGRIIARKLNAAKGPVAVFIPKRGFSAIDVEGKPFYDPEA
HHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCH
DQALIEALEANLAPHIEVHEWDTDINDPAFARAMAARLDELIRAQQPAEAAS
HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PTVVLIGTLDTKGVEYEFLRQRLRERGCEVLLIDAGVLGAPQAAPDISREEVARAAGAD
CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
VAELAARGDRGAAIATMARGATAIVLDLYRAGRLHGILALGGSGGSSLATTAMRALPIGV
HHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCH
PKLMVSTLASGDTRPYVGASDIAMLYPVVDIAGINRISERILTNAAAAIAGMAQAYETFR
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSAPSKPLIGATMFGVTTPCVTEARKELEGRGYEVLVFHATGTGGQAMENLVKGGFLAGV
CCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHH
LDITTTELADELVGGVLSAGPERLEAAGAMGIPQVVSLGALDMVNFGPLETVPERFRHRR
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCHHCCCCCCHHHHHHHHHHHH
LYQHNPTVTLMRTTREECAELGRIIARKLNAAKGPVAVFIPKRGFSAIDVEGKPFYDPEA
HHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCCCCCH
DQALIEALEANLAPHIEVHEWDTDINDPAFARAMAARLDELIRAQQPAEAAS
HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12552129 [H]