Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635482

Identifier: 221635482

GI number: 221635482

Start: 64834

End: 65556

Strand: Reverse

Name: 221635482

Synonym: trd_A0076

Alternate gene names: NA

Gene position: 65556-64834 (Counterclockwise)

Preceding gene: 221635483

Following gene: 221635481

Centisome position: 7.14

GC content: 61.0

Gene sequence:

>723_bases
GTGGGTGTCAAGCTGATCGATCTTTCCATGCCGGTGCACAACGAGATGATGACCTTTCCCCGTGTTCCACCACCGAAGAT
CGAGATGCACGAGTCGTGGGAAGAGTTCGCCGAGCGGATCGGCGCCGCCCAGTACGGTGCGACCTGGCTCACCGCGAGTT
ACCGGCTCGAACTCAACGACCACGTGGGGACACACATCGATGCCCGCAAGCATTTGGTCGCCGAAGCGCCGGGCCCCGAA
GGGATCCCGCTCGAGTACTGTTACGCCGATGGCGTGCTCCTCGACTTCCGTCATAAGGAAAAGGGCTCCGGCATCACTGC
CGCGGAGATTCGCGAGGCTCTCGACAAGATCGGGTATCGCCTCAAGCCGCTCGATATCGTCCTCATCTGGACAGGGGCTG
GAGCGTACCAGAACGAGCAACGCTATCTCACCGACCACTGTGGCATGACTCGCGAAGCGACGCTCTGGCTCATCGACCAG
GGCATCAAGGTGATGGGGATCGATGCGATTACGTTCGACCCACCGGTCTGGGCGATGTTCGAGCGCAAGCAGTTTTGGGA
AGCGCATCTCGTCATGCGCGAACGCGAGTACTATCACATCGAGAACATGACCAACTTCGACCAGATCCCGCGACCGTACG
GTTTCAAGGTCGCCGCCTTCCCCATCAAATGGGTCGGCACCACGGCGGCACCCGTCCGCGCGGTCGCCATCGTCGAGGAG
TAG

Upstream 100 bases:

>100_bases
ATGCGTCGCCACATCGAGGAGCCGGGTCGGTGGGTGTACGAAGCCTTGTCGCGTGAAGATCCGGAACCACAGCAGAGTTC
CTGACGAAAGGAGCACGTTC

Downstream 100 bases:

>100_bases
GAGCGATGAGTCGTGCGGCGACCGTTGCTCTCGTCCGCTGGTTCCACGATCCGGCCTGTACCGACGTCCACCAGGCTGGT
GGCAAGGGGGCAAGCCTCGC

Product: cyclase family protein

Products: NA

Alternate protein names: Cyclase; Polyketide Cyclase; Cyclase Superfamily; Metal-Dependent Hydrolase; Kynurenine Formamidase; Arylformamidase; Cyclase Superfamily Protein

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MGVKLIDLSMPVHNEMMTFPRVPPPKIEMHESWEEFAERIGAAQYGATWLTASYRLELNDHVGTHIDARKHLVAEAPGPE
GIPLEYCYADGVLLDFRHKEKGSGITAAEIREALDKIGYRLKPLDIVLIWTGAGAYQNEQRYLTDHCGMTREATLWLIDQ
GIKVMGIDAITFDPPVWAMFERKQFWEAHLVMREREYYHIENMTNFDQIPRPYGFKVAAFPIKWVGTTAAPVRAVAIVEE

Sequences:

>Translated_240_residues
MGVKLIDLSMPVHNEMMTFPRVPPPKIEMHESWEEFAERIGAAQYGATWLTASYRLELNDHVGTHIDARKHLVAEAPGPE
GIPLEYCYADGVLLDFRHKEKGSGITAAEIREALDKIGYRLKPLDIVLIWTGAGAYQNEQRYLTDHCGMTREATLWLIDQ
GIKVMGIDAITFDPPVWAMFERKQFWEAHLVMREREYYHIENMTNFDQIPRPYGFKVAAFPIKWVGTTAAPVRAVAIVEE
>Mature_239_residues
GVKLIDLSMPVHNEMMTFPRVPPPKIEMHESWEEFAERIGAAQYGATWLTASYRLELNDHVGTHIDARKHLVAEAPGPEG
IPLEYCYADGVLLDFRHKEKGSGITAAEIREALDKIGYRLKPLDIVLIWTGAGAYQNEQRYLTDHCGMTREATLWLIDQG
IKVMGIDAITFDPPVWAMFERKQFWEAHLVMREREYYHIENMTNFDQIPRPYGFKVAAFPIKWVGTTAAPVRAVAIVEE

Specific function: Unknown

COG id: COG1878

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27431; Mature: 27300

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKLIDLSMPVHNEMMTFPRVPPPKIEMHESWEEFAERIGAAQYGATWLTASYRLELND
CCEEEEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCEEEEEEEEEEECC
HVGTHIDARKHLVAEAPGPEGIPLEYCYADGVLLDFRHKEKGSGITAAEIREALDKIGYR
CCCCCCCCCHHEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCE
LKPLDIVLIWTGAGAYQNEQRYLTDHCGMTREATLWLIDQGIKVMGIDAITFDPPVWAMF
ECCEEEEEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCCHHHHH
ERKQFWEAHLVMREREYYHIENMTNFDQIPRPYGFKVAAFPIKWVGTTAAPVRAVAIVEE
HHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure 
GVKLIDLSMPVHNEMMTFPRVPPPKIEMHESWEEFAERIGAAQYGATWLTASYRLELND
CEEEEEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCEEEEEEEEEEECC
HVGTHIDARKHLVAEAPGPEGIPLEYCYADGVLLDFRHKEKGSGITAAEIREALDKIGYR
CCCCCCCCCHHEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCE
LKPLDIVLIWTGAGAYQNEQRYLTDHCGMTREATLWLIDQGIKVMGIDAITFDPPVWAMF
ECCEEEEEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCCHHHHH
ERKQFWEAHLVMREREYYHIENMTNFDQIPRPYGFKVAAFPIKWVGTTAAPVRAVAIVEE
HHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA