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The map label for this gene is fliN [H]

Identifier: 221635434

GI number: 221635434

Start: 25285

End: 25671

Strand: Reverse

Name: fliN [H]

Synonym: trd_A0028

Alternate gene names: 221635434

Gene position: 25671-25285 (Counterclockwise)

Preceding gene: 221635435

Following gene: 221635433

Centisome position: 2.8

GC content: 65.37

Gene sequence:

>387_bases
ATGGCCGACCGTGACGACACCCTGAACCGCGGCCAGGAGCCCAGCTCGGTTCGGCCTCCCGAAACCCCGATCCAGGAGGC
GCGCTTCGTCGACCTGCGCGATCAGCCGATCGGCAACGGTCGCCAGGGCATCGATTTCTTGCGTGACGTGGAAGTCGAGC
TGACTGCTGAACTCGGTTCGGCTCGCATGCGCATCAAGCACATCCTCGGTCTGCGGCCCGGTTCGGTCGTCGAACTCGAT
CGCCTCGCTGGTGAGCCGGTTGAGCTGACCATCAACAAGACGCTGATCGCTCGCGGCGAGGTCGTGGTCGTCGACGAAAA
GTTCGCCGTCCGCATCACCGAGATCGTCTCGCCCGAGAAGCGGCTGGCGGAGGGTGGCGGCACGTGA

Upstream 100 bases:

>100_bases
CTGGCCAGCGTGGGCGTTCCCTCGCGATACGCATCGCTGGGACGCTCACCGAGGATTGGCCACGCGACGAGGAGCTCGAT
CAGGAAGGAGGCACTGCCCT

Downstream 100 bases:

>100_bases
TGCCTCGTCTACCTCTCCTCTCCCGTCTCCCTCGCCAGTGGGCCGTCCTCGCGTTCGTCTTCCTGTTCGCCCTCCTCGCC
GGTCTGGCCTGGTCAGTCAC

Product: flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MADRDDTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGSARMRIKHILGLRPGSVVELD
RLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEKRLAEGGGT

Sequences:

>Translated_128_residues
MADRDDTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGSARMRIKHILGLRPGSVVELD
RLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEKRLAEGGGT
>Mature_127_residues
ADRDDTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGSARMRIKHILGLRPGSVVELDR
LAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEKRLAEGGGT

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=117, Percent_Identity=45.2991452991453, Blast_Score=92, Evalue=9e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 14095; Mature: 13964

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRDDTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCEEEEECCCH
ARMRIKHILGLRPGSVVELDRLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEK
HHHHHHHHHCCCCCCEEEHHHHCCCCEEEEECCEEEECCCEEEECCCCEEEHHHHCCCHH
RLAEGGGT
HHHCCCCC
>Mature Secondary Structure 
ADRDDTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGS
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCEEEEECCCH
ARMRIKHILGLRPGSVVELDRLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEK
HHHHHHHHHCCCCCCEEEHHHHCCCCEEEEECCEEEECCCEEEECCCCEEEHHHHCCCHH
RLAEGGGT
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2656645; 11677609; 9324257 [H]