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The map label for this gene is yrrI [H]

Identifier: 221635410

GI number: 221635410

Start: 4258

End: 5721

Strand: Reverse

Name: yrrI [H]

Synonym: trd_A0004

Alternate gene names: 221635410

Gene position: 5721-4258 (Counterclockwise)

Preceding gene: 221635411

Following gene: 221635409

Centisome position: 0.62

GC content: 66.19

Gene sequence:

>1464_bases
ATGCACGTGCTCGATCGTGTCCGGCAGTCCCGTGAACTCCTTCTCGTCACCGCGCTCGTCGCGCTCGTTCTCGGCTGGGC
CTTGCTCCACCTCGCCCATATCCTCACCCCCTTCATCGTCGCCGCAGTCTTCGCGTACCTGGTCCACCCGCTCGTCGATT
GGCTGGAGCGACGCCTCCGTCTTCCGCGGATCGCCGTTGTCCTCGTGCTCTACCTGGTCCTGATCGGCCTGCTGGTTCTC
GGTGGACTCCTGCTCGCTCCCTCGCTGGCCCAGCAAGCGCAGGCGCTGGCTACCACGGTCCCCCGCGTCATCGAGACGAT
CGAGCAGCGGCTCGCGCGCGCCCCCGAACTCCGTTTTGGCGAACTCGCCATCGACACGCGCGGACTCTTGGACCGTCTGG
ACGCTGCTGCGCAGTCGCTCGCCGAGCGGTTCAGTCGCGAGGCCGTTCCACTCGTCCTCGCAACGGTGGAGGCGCTCATC
AAGTCGTTCGTTTTCTTCCTCGTCAGCTTTTACGGTCTCTTGCAGGGCCGCACATTGGTCGCGCGCCTGCGGGCACTCGC
GCCACGCCGGCACCAGAAGACAGTGAGCCGGATCCTCGGCCAAGTCGACGCGACCTTCCGGGCCTATATCCGTGCGCAGC
TCGTCCTGTTCGCGATCATGGCGACGGCCACCTACATCGCGCTCACCATCCTGGAAGTCAAGTATCGACTTGCCCTGGCG
ATCGCCACTGGGCTGCTCGAGCTCATCCCCTTTATCGGTCCGTGGACTGCTGGTGCCATCGCCGTCAGCGTAGCCTTGAC
ACAGGGGACCGCGCCCTTCGGCTGGTCCTCCCTCCAGCTCGCGGTCGTCGTCGCACTCGTCTACCTGGTTCTCCGCCTGC
TCGAGGATCATTTCGTCATCCCTCAACTCGTCGGCCATTTTGTCCGGCTGCATCCGGTCGTTGTCCTCTTCGGGATCCTG
GCCGGTGCCAGTGTGGCGGGCATTCTCGGCCTCCTCCTCGCTGTCCCGGTGCTGGCTGCGCTCAAGATCGTCGTCCTCAC
CGTGCTGGAAGAACTACGCCACCCGCCACCGCGCCAAATCCTCATGCTGCGTGACCGCTCGCTCCTCCCCACTCTGCCCG
ACTGGCTCGCCGCTGCTCCGGCCCGACGCGATGTCCTCCTGATCGTGCTGCCCGGCGTCGTGGTCTGGGATGATCTTCCG
CTTCTTCAGGCAGCGAGCCGGACCGCTCTCGATCACGATGTCGAGGTGCTCGTCGTTACCCCGGATCCCGTCGCCTCCAG
CCTGGCCACAGCTGTCGGCCTGCGCGTCGTGTCGCGCTTGCCGGACGGTTGGGGTGCGGATGCCGAACTCCTCCTCGTCC
TCGACACGTCTCGATCGGCTGCGAGTGAGTGGCCCGTGCCGGTGACCTCGCCGGTCGGGCCGGTCCGCGAAAACGCTGCG
GAGCCGAAGGAGGGTGTGCCATGA

Upstream 100 bases:

>100_bases
GTGCGACACGCGTCCTGCTGCGGTAGAATGCGCCTGTGGAACGTGCGATCCTCCCTCCGCTGGCAAGGCAGAGGGCTGGA
ACGGGGCGAGTCCGAACAGC

Downstream 100 bases:

>100_bases
CGTCTGGAACAGTCCGGCGCTATCGGAACTACATCGGTGGCGAGTGGGTCGAACCAGCCAGCGGTGAGTACCGTCCTGAT
ATCGACCCGGCCGATAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MHVLDRVRQSRELLLVTALVALVLGWALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLRLPRIAVVLVLYLVLIGLLVL
GGLLLAPSLAQQAQALATTVPRVIETIEQRLARAPELRFGELAIDTRGLLDRLDAAAQSLAERFSREAVPLVLATVEALI
KSFVFFLVSFYGLLQGRTLVARLRALAPRRHQKTVSRILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALA
IATGLLELIPFIGPWTAGAIAVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVIPQLVGHFVRLHPVVVLFGIL
AGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPRQILMLRDRSLLPTLPDWLAAAPARRDVLLIVLPGVVVWDDLP
LLQAASRTALDHDVEVLVVTPDPVASSLATAVGLRVVSRLPDGWGADAELLLVLDTSRSAASEWPVPVTSPVGPVRENAA
EPKEGVP

Sequences:

>Translated_487_residues
MHVLDRVRQSRELLLVTALVALVLGWALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLRLPRIAVVLVLYLVLIGLLVL
GGLLLAPSLAQQAQALATTVPRVIETIEQRLARAPELRFGELAIDTRGLLDRLDAAAQSLAERFSREAVPLVLATVEALI
KSFVFFLVSFYGLLQGRTLVARLRALAPRRHQKTVSRILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALA
IATGLLELIPFIGPWTAGAIAVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVIPQLVGHFVRLHPVVVLFGIL
AGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPRQILMLRDRSLLPTLPDWLAAAPARRDVLLIVLPGVVVWDDLP
LLQAASRTALDHDVEVLVVTPDPVASSLATAVGLRVVSRLPDGWGADAELLLVLDTSRSAASEWPVPVTSPVGPVRENAA
EPKEGVP
>Mature_487_residues
MHVLDRVRQSRELLLVTALVALVLGWALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLRLPRIAVVLVLYLVLIGLLVL
GGLLLAPSLAQQAQALATTVPRVIETIEQRLARAPELRFGELAIDTRGLLDRLDAAAQSLAERFSREAVPLVLATVEALI
KSFVFFLVSFYGLLQGRTLVARLRALAPRRHQKTVSRILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALA
IATGLLELIPFIGPWTAGAIAVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVIPQLVGHFVRLHPVVVLFGIL
AGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPRQILMLRDRSLLPTLPDWLAAAPARRDVLLIVLPGVVVWDDLP
LLQAASRTALDHDVEVLVVTPDPVASSLATAVGLRVVSRLPDGWGADAELLLVLDTSRSAASEWPVPVTSPVGPVRENAA
EPKEGVP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=336, Percent_Identity=25, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 52769; Mature: 52769

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVLDRVRQSRELLLVTALVALVLGWALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPRIAVVLVLYLVLIGLLVLGGLLLAPSLAQQAQALATTVPRVIETIEQRLARAPELRFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ELAIDTRGLLDRLDAAAQSLAERFSREAVPLVLATVEALIKSFVFFLVSFYGLLQGRTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ARLRALAPRRHQKTVSRILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATGLLELIPFIGPWTAGAIAVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVI
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
PQLVGHFVRLHPVVVLFGILAGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE
LMLRDRSLLPTLPDWLAAAPARRDVLLIVLPGVVVWDDLPLLQAASRTALDHDVEVLVVT
EEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHCCCCCEEEEEC
PDPVASSLATAVGLRVVSRLPDGWGADAELLLVLDTSRSAASEWPVPVTSPVGPVRENAA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCC
EPKEGVP
CCCCCCC
>Mature Secondary Structure
MHVLDRVRQSRELLLVTALVALVLGWALLHLAHILTPFIVAAVFAYLVHPLVDWLERRLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPRIAVVLVLYLVLIGLLVLGGLLLAPSLAQQAQALATTVPRVIETIEQRLARAPELRFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ELAIDTRGLLDRLDAAAQSLAERFSREAVPLVLATVEALIKSFVFFLVSFYGLLQGRTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ARLRALAPRRHQKTVSRILGQVDATFRAYIRAQLVLFAIMATATYIALTILEVKYRLALA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATGLLELIPFIGPWTAGAIAVSVALTQGTAPFGWSSLQLAVVVALVYLVLRLLEDHFVI
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
PQLVGHFVRLHPVVVLFGILAGASVAGILGLLLAVPVLAALKIVVLTVLEELRHPPPRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE
LMLRDRSLLPTLPDWLAAAPARRDVLLIVLPGVVVWDDLPLLQAASRTALDHDVEVLVVT
EEECCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHCCCCCEEEEEC
PDPVASSLATAVGLRVVSRLPDGWGADAELLLVLDTSRSAASEWPVPVTSPVGPVRENAA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCC
EPKEGVP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]