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The map label for this gene is dan [H]

Identifier: 221633916

GI number: 221633916

Start: 1961351

End: 1962979

Strand: Reverse

Name: dan [H]

Synonym: trd_1943

Alternate gene names: 221633916

Gene position: 1962979-1961351 (Counterclockwise)

Preceding gene: 221633917

Following gene: 221633915

Centisome position: 98.0

GC content: 66.61

Gene sequence:

>1629_bases
ATGGAGATCGATCTCCTCATCCGCAACGGGCGCGTGGTGGACGGGACCGGGAATCCCTGGTTTCAGGCCGACGTCGCCGT
CCGCGGCGACCGGATCGTCGCCGTCGCGCCACCCGGTCGGATCGAGCCGAGGAACGCGCGCGAAGTGGTCGATGCGAGCG
GGTGCGTCGTCTCTCCTGGTTTCATCGACATCCAGAGCCACTCGATCTACCCGCTCATGCGCGATGGTCGCTCGCTCTCC
AAGATCGCGCAGGGAGTCACGACCGAGATCATGGGTGAGGGGTGGACACCAGCCCCGTTCGGAGGCCGCATCAGCGAACC
GATCCCCAGCGCCTACTTCGCTCGTCGCTTACCCGAATGGGAAGAGCGCGCGCGGCAGTGGCGGCGCTTCCGCGATTGGC
TCGAAGCGATGGTCGAGCGTGGGGTCTCACCGAACATCGGTTCCTTCCTGGCTGGTGGAACGCTCCGCGAGTACGTCAAG
GGCTACGACATGTCACCGGCGAGCCCGGACGAGATCGCCGCCATGCGGCGTCTCGTCGCCGAAGCGATGGAAGATGGAGC
CTTCGGGGTCGCCTACGCGCTGATCTATCCTCCCGACGCGTATGCCTCCACCGACGAGATCGTGGAAATCTGCCGGGAAG
TGGCGCGCTGGGGCGGCCTCTACATCACGCACATCCGTTCCGAGGGTGAGCGACTCTTCGAGGCGCTCGAGGAAGCGATC
CAGATCGGCCAGCAGGCTGGCATCCCGGTCGAGATCTACCACCTCAAGGCATCGGGACGCCGCAACTGGTGGAAGTTTCC
CAGCGTGCTGGAACGGATCGAGCGCGCTCGACGCGACGGAATCGACGTCACCGCCGACGTCTACCCCTACACCGCAGCGG
GAACCGGTCTTGCCTCCGTCTTGCCACCCTGGGTGGCAGCCGGCGGACGCTTCTACGAGAACCTGCGCGACCCCGCCATG
CGCGAGCGGATTCGGCGAGAGGTCACCAACCCGTCCGGCGACTGGGAAGCGCTCGGCACCGAGGCCGGCCCGGAGGGGAT
CATGCCGGTCGGTCTGCACCATCCCAGCCTGCTGCGCTTCGTCGGTAAGCGGCTCTCCGAAATCGCAGCGGAGCGCGGGC
AGGACTGGATCGATGCCGCGATCGATCTCCTTTCGATCGAAGGACGGAATATCTTCACGATCTACTTCGTGATGGACGAG
ACGAACGTGCGGGCAGCGCTCCGGCAGCCTTGGATCAAGGTCGCGACCGATGCCGGTGGACTCGATCCGGCCTGGGCGCG
TGCCGAGGGTCCCGTGCATCCGCGCGCCTACGGCACCTACCCCCGCGTCCTGGCCCGCTTCGTGCGGGAACTGCGCGACC
TGACACTGGAAGAGGCGATCCGCAAGATGACCTCGGCAGTGGCAGACCGGCTGGGAATCCGCGACCGCGGACAGGTGCGC
CCCGGCTTCTTCGCCGACCTCGTCGTTTTCGATCCCGAGTCGGTCGCCGATCGAGCCACGTTCGAGGATCCGCACCAGCT
TGCAACCGGAATCCGCTCCGTTTGGGTCAACGGCGTCTGCGTGCTCCGCGACGGTATCCACACCGGAGCCATGCCAGGCC
GCATCGTCTCCGGCCCGGCCCGTGCGTAA

Upstream 100 bases:

>100_bases
GTGGCGTGAGCACCGCTCTTCCTGAAGCGAGGCTGGTCCCTCGCCCCGCTCGCCCGGCTGCGTTACGATAGCCTCGACTG
AGCGAGCTGGGAGGGCGAGC

Downstream 100 bases:

>100_bases
GGGAGGATCGATGCTCGCGCTCCAGATCGTGGAGAGTGTACCGCGCTATCTCTTGGCCAAGGCGGTCGGTCGCTGGCAAC
CTGCGGCGTACTGGAACGGC

Product: N-acyl-D-aspartate deacylase

Products: NA

Alternate protein names: N-acyl-D-amino-acid deacylase [H]

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MEIDLLIRNGRVVDGTGNPWFQADVAVRGDRIVAVAPPGRIEPRNAREVVDASGCVVSPGFIDIQSHSIYPLMRDGRSLS
KIAQGVTTEIMGEGWTPAPFGGRISEPIPSAYFARRLPEWEERARQWRRFRDWLEAMVERGVSPNIGSFLAGGTLREYVK
GYDMSPASPDEIAAMRRLVAEAMEDGAFGVAYALIYPPDAYASTDEIVEICREVARWGGLYITHIRSEGERLFEALEEAI
QIGQQAGIPVEIYHLKASGRRNWWKFPSVLERIERARRDGIDVTADVYPYTAAGTGLASVLPPWVAAGGRFYENLRDPAM
RERIRREVTNPSGDWEALGTEAGPEGIMPVGLHHPSLLRFVGKRLSEIAAERGQDWIDAAIDLLSIEGRNIFTIYFVMDE
TNVRAALRQPWIKVATDAGGLDPAWARAEGPVHPRAYGTYPRVLARFVRELRDLTLEEAIRKMTSAVADRLGIRDRGQVR
PGFFADLVVFDPESVADRATFEDPHQLATGIRSVWVNGVCVLRDGIHTGAMPGRIVSGPARA

Sequences:

>Translated_542_residues
MEIDLLIRNGRVVDGTGNPWFQADVAVRGDRIVAVAPPGRIEPRNAREVVDASGCVVSPGFIDIQSHSIYPLMRDGRSLS
KIAQGVTTEIMGEGWTPAPFGGRISEPIPSAYFARRLPEWEERARQWRRFRDWLEAMVERGVSPNIGSFLAGGTLREYVK
GYDMSPASPDEIAAMRRLVAEAMEDGAFGVAYALIYPPDAYASTDEIVEICREVARWGGLYITHIRSEGERLFEALEEAI
QIGQQAGIPVEIYHLKASGRRNWWKFPSVLERIERARRDGIDVTADVYPYTAAGTGLASVLPPWVAAGGRFYENLRDPAM
RERIRREVTNPSGDWEALGTEAGPEGIMPVGLHHPSLLRFVGKRLSEIAAERGQDWIDAAIDLLSIEGRNIFTIYFVMDE
TNVRAALRQPWIKVATDAGGLDPAWARAEGPVHPRAYGTYPRVLARFVRELRDLTLEEAIRKMTSAVADRLGIRDRGQVR
PGFFADLVVFDPESVADRATFEDPHQLATGIRSVWVNGVCVLRDGIHTGAMPGRIVSGPARA
>Mature_542_residues
MEIDLLIRNGRVVDGTGNPWFQADVAVRGDRIVAVAPPGRIEPRNAREVVDASGCVVSPGFIDIQSHSIYPLMRDGRSLS
KIAQGVTTEIMGEGWTPAPFGGRISEPIPSAYFARRLPEWEERARQWRRFRDWLEAMVERGVSPNIGSFLAGGTLREYVK
GYDMSPASPDEIAAMRRLVAEAMEDGAFGVAYALIYPPDAYASTDEIVEICREVARWGGLYITHIRSEGERLFEALEEAI
QIGQQAGIPVEIYHLKASGRRNWWKFPSVLERIERARRDGIDVTADVYPYTAAGTGLASVLPPWVAAGGRFYENLRDPAM
RERIRREVTNPSGDWEALGTEAGPEGIMPVGLHHPSLLRFVGKRLSEIAAERGQDWIDAAIDLLSIEGRNIFTIYFVMDE
TNVRAALRQPWIKVATDAGGLDPAWARAEGPVHPRAYGTYPRVLARFVRELRDLTLEEAIRKMTSAVADRLGIRDRGQVR
PGFFADLVVFDPESVADRATFEDPHQLATGIRSVWVNGVCVLRDGIHTGAMPGRIVSGPARA

Specific function: Has a wide specificity; hydrolyzes N-acyl derivative of neutral D-amino acids [H]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR023100
- InterPro:   IPR012855
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3; PF07908 D-aminoacyl_C [H]

EC number: =3.5.1.81 [H]

Molecular weight: Translated: 60094; Mature: 60094

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDLLIRNGRVVDGTGNPWFQADVAVRGDRIVAVAPPGRIEPRNAREVVDASGCVVSPG
CCEEEEEECCEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHCCCCCEECCC
FIDIQSHSIYPLMRDGRSLSKIAQGVTTEIMGEGWTPAPFGGRISEPIPSAYFARRLPEW
EEEECCCCCCHHHHCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCH
EERARQWRRFRDWLEAMVERGVSPNIGSFLAGGTLREYVKGYDMSPASPDEIAAMRRLVA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
EAMEDGAFGVAYALIYPPDAYASTDEIVEICREVARWGGLYITHIRSEGERLFEALEEAI
HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHH
QIGQQAGIPVEIYHLKASGRRNWWKFPSVLERIERARRDGIDVTADVYPYTAAGTGLASV
HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
LPPWVAAGGRFYENLRDPAMRERIRREVTNPSGDWEALGTEAGPEGIMPVGLHHPSLLRF
CCHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHH
VGKRLSEIAAERGQDWIDAAIDLLSIEGRNIFTIYFVMDETNVRAALRQPWIKVATDAGG
HHHHHHHHHHHHCCHHHHHHHHHHEECCCEEEEEEEEEECCCHHHHHHCCCCEEECCCCC
LDPAWARAEGPVHPRAYGTYPRVLARFVRELRDLTLEEAIRKMTSAVADRLGIRDRGQVR
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC
PGFFADLVVFDPESVADRATFEDPHQLATGIRSVWVNGVCVLRDGIHTGAMPGRIVSGPA
CCCEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC
RA
CC
>Mature Secondary Structure
MEIDLLIRNGRVVDGTGNPWFQADVAVRGDRIVAVAPPGRIEPRNAREVVDASGCVVSPG
CCEEEEEECCEEEECCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHCCCCCEECCC
FIDIQSHSIYPLMRDGRSLSKIAQGVTTEIMGEGWTPAPFGGRISEPIPSAYFARRLPEW
EEEECCCCCCHHHHCCCHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCH
EERARQWRRFRDWLEAMVERGVSPNIGSFLAGGTLREYVKGYDMSPASPDEIAAMRRLVA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
EAMEDGAFGVAYALIYPPDAYASTDEIVEICREVARWGGLYITHIRSEGERLFEALEEAI
HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHH
QIGQQAGIPVEIYHLKASGRRNWWKFPSVLERIERARRDGIDVTADVYPYTAAGTGLASV
HHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH
LPPWVAAGGRFYENLRDPAMRERIRREVTNPSGDWEALGTEAGPEGIMPVGLHHPSLLRF
CCHHHHCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHH
VGKRLSEIAAERGQDWIDAAIDLLSIEGRNIFTIYFVMDETNVRAALRQPWIKVATDAGG
HHHHHHHHHHHHCCHHHHHHHHHHEECCCEEEEEEEEEECCCHHHHHHCCCCEEECCCCC
LDPAWARAEGPVHPRAYGTYPRVLARFVRELRDLTLEEAIRKMTSAVADRLGIRDRGQVR
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC
PGFFADLVVFDPESVADRATFEDPHQLATGIRSVWVNGVCVLRDGIHTGAMPGRIVSGPA
CCCEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8541651 [H]