| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is gutB [H]
Identifier: 221633915
GI number: 221633915
Start: 1960099
End: 1961340
Strand: Reverse
Name: gutB [H]
Synonym: trd_1942
Alternate gene names: 221633915
Gene position: 1961340-1960099 (Counterclockwise)
Preceding gene: 221633916
Following gene: 221633912
Centisome position: 97.92
GC content: 66.1
Gene sequence:
>1242_bases ATGCTCGCGCTCCAGATCGTGGAGAGTGTACCGCGCTATCTCTTGGCCAAGGCGGTCGGTCGCTGGCAACCTGCGGCGTA CTGGAACGGCCTCGGGCTTCTCCAGTTACGCGACGTCCCCGAGCCCCGCCTGCCGACACCAGAATGGGTCAGGATCACCA CGCGCTACAGTGGGATCTGTGGAAGCGACGTCGGACTGATCACCCTGCACGCCAGCCCGACCACCTCGCCGCTGGTCTCT TTCCCTTTCACGCTCGGCCATGAGGTAACCGGACAGATCAGCGAGCTCGGCTCAGCAGTGGATGGCTTTCGGGTCGGGCA ACGCGTCACGGTCAACCCGCTGCTCGCGTGTGCCGCACGCGGTTTTCGGGAACCATGTAGCGAGTGCGCGCGTGGTCTCC CGAACCGCTGTCTCCGCTTCCGCGAAGGCACGATCGCGCCCGGTATCATGATCGGCTTCTGCCGCGACACGGGTGGAGGC TGGAGCGCCAGTTTCGTCGCTCACCGAGCACAGCTGATCCCGATCCCTGACCAGCTGACAGACGAGGAAGCCGTGTTGGC CGAGCCGTTCGGTGTCGCGCTCCATGCAGTGCTCCAAAACCGACCTCCCGACACAGCGACCGTTCTCGTCCTCGGTGCTG GCATCATCGGACTCCTGACGGTCGCCGCACTGCGGGCGATCGGATCGCAAGCCCGCATCCTGGTGACGGCAAAGTATCCG TTCCAAGCCCGAGCTGCCGAGCGACTCGGAGCCGATCTCGTTCTCCTGGGGCGGACAGGCCCGGCGCTCTATCGCGAGAT CGCGCGCCTCACGGGTGCGCGTGTCCTGCGTGCACGCTTCGGTCGCTGGTTGGTCCAGGGTGGGGTCGACCAGGTATTCG ACTGTGTGGGTTCCAGTCGGTCCGTCCACGACGCGCTCACGCTCACGCGGGCTGGCGGGCGCGTGGTCCTCGTCGGTCTG GCCAGCGACCCACGCAACGTGGACTGGACGCCGATCTGGCTGCGCGAGGTCGAGATCCGTGGGTCGATGGCCTATGCGGA GGAAGAACTGGACGGCATCCGTGCCTCGAGCATCGCCCATGGAGTGCGGCTGATGGCCGAGCGTCGCGTCGAGTTGGGCT GGCTCGTCACCCATCGCTTCGCACTCGCCGAGTACCAGGAAGCGCTGGCGACGGTGACTGGCAAAGGGGCGAACGGCGTC ATCAAGGCCGTCTTCGCCTTTTCCGGCGGCAACCGAGTCTGA
Upstream 100 bases:
>100_bases GTTTGGGTCAACGGCGTCTGCGTGCTCCGCGACGGTATCCACACCGGAGCCATGCCAGGCCGCATCGTCTCCGGCCCGGC CCGTGCGTAAGGGAGGATCG
Downstream 100 bases:
>100_bases GGGGATCACCGCTCGAGCGCAACCGAACCGAGACGACATCCCCAGTAGGTTACGCTCGCTGCGATCAGGCCATCGGGACT TGCGGGATCAGCTTCCCATC
Product: putative alcohol dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MLALQIVESVPRYLLAKAVGRWQPAAYWNGLGLLQLRDVPEPRLPTPEWVRITTRYSGICGSDVGLITLHASPTTSPLVS FPFTLGHEVTGQISELGSAVDGFRVGQRVTVNPLLACAARGFREPCSECARGLPNRCLRFREGTIAPGIMIGFCRDTGGG WSASFVAHRAQLIPIPDQLTDEEAVLAEPFGVALHAVLQNRPPDTATVLVLGAGIIGLLTVAALRAIGSQARILVTAKYP FQARAAERLGADLVLLGRTGPALYREIARLTGARVLRARFGRWLVQGGVDQVFDCVGSSRSVHDALTLTRAGGRVVLVGL ASDPRNVDWTPIWLREVEIRGSMAYAEEELDGIRASSIAHGVRLMAERRVELGWLVTHRFALAEYQEALATVTGKGANGV IKAVFAFSGGNRV
Sequences:
>Translated_413_residues MLALQIVESVPRYLLAKAVGRWQPAAYWNGLGLLQLRDVPEPRLPTPEWVRITTRYSGICGSDVGLITLHASPTTSPLVS FPFTLGHEVTGQISELGSAVDGFRVGQRVTVNPLLACAARGFREPCSECARGLPNRCLRFREGTIAPGIMIGFCRDTGGG WSASFVAHRAQLIPIPDQLTDEEAVLAEPFGVALHAVLQNRPPDTATVLVLGAGIIGLLTVAALRAIGSQARILVTAKYP FQARAAERLGADLVLLGRTGPALYREIARLTGARVLRARFGRWLVQGGVDQVFDCVGSSRSVHDALTLTRAGGRVVLVGL ASDPRNVDWTPIWLREVEIRGSMAYAEEELDGIRASSIAHGVRLMAERRVELGWLVTHRFALAEYQEALATVTGKGANGV IKAVFAFSGGNRV >Mature_413_residues MLALQIVESVPRYLLAKAVGRWQPAAYWNGLGLLQLRDVPEPRLPTPEWVRITTRYSGICGSDVGLITLHASPTTSPLVS FPFTLGHEVTGQISELGSAVDGFRVGQRVTVNPLLACAARGFREPCSECARGLPNRCLRFREGTIAPGIMIGFCRDTGGG WSASFVAHRAQLIPIPDQLTDEEAVLAEPFGVALHAVLQNRPPDTATVLVLGAGIIGLLTVAALRAIGSQARILVTAKYP FQARAAERLGADLVLLGRTGPALYREIARLTGARVLRARFGRWLVQGGVDQVFDCVGSSRSVHDALTLTRAGGRVVLVGL ASDPRNVDWTPIWLREVEIRGSMAYAEEELDGIRASSIAHGVRLMAERRVELGWLVTHRFALAEYQEALATVTGKGANGV IKAVFAFSGGNRV
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=365, Percent_Identity=30.4109589041096, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1787863, Length=354, Percent_Identity=26.8361581920904, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI226510992, Length=352, Percent_Identity=29.8295454545455, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788073, Length=368, Percent_Identity=27.1739130434783, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1788075, Length=389, Percent_Identity=25.706940874036, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI87082125, Length=388, Percent_Identity=29.8969072164948, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790045, Length=359, Percent_Identity=23.9554317548747, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788407, Length=366, Percent_Identity=25.4098360655738, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1790718, Length=294, Percent_Identity=25.5102040816327, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562876, Length=369, Percent_Identity=30.0813008130081, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17562878, Length=386, Percent_Identity=30.0518134715026, Blast_Score=115, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6319258, Length=376, Percent_Identity=27.1276595744681, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6323099, Length=372, Percent_Identity=24.4623655913978, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6319955, Length=388, Percent_Identity=23.9690721649485, Blast_Score=106, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6322619, Length=388, Percent_Identity=23.9690721649485, Blast_Score=106, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6319257, Length=348, Percent_Identity=25.5747126436782, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI17137530, Length=382, Percent_Identity=30.6282722513089, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI17737897, Length=381, Percent_Identity=28.6089238845144, Blast_Score=108, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 44453; Mature: 44453
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALQIVESVPRYLLAKAVGRWQPAAYWNGLGLLQLRDVPEPRLPTPEWVRITTRYSGIC CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEEEEECCCC GSDVGLITLHASPTTSPLVSFPFTLGHEVTGQISELGSAVDGFRVGQRVTVNPLLACAAR CCCCCEEEEECCCCCCCCEECCHHCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH GFREPCSECARGLPNRCLRFREGTIAPGIMIGFCRDTGGGWSASFVAHRAQLIPIPDQLT HHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCEEECCCCCCC DEEAVLAEPFGVALHAVLQNRPPDTATVLVLGAGIIGLLTVAALRAIGSQARILVTAKYP CCCHHHHCHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCC FQARAAERLGADLVLLGRTGPALYREIARLTGARVLRARFGRWLVQGGVDQVFDCVGSSR CHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC SVHDALTLTRAGGRVVLVGLASDPRNVDWTPIWLREVEIRGSMAYAEEELDGIRASSIAH CHHHHHEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHH GVRLMAERRVELGWLVTHRFALAEYQEALATVTGKGANGVIKAVFAFSGGNRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MLALQIVESVPRYLLAKAVGRWQPAAYWNGLGLLQLRDVPEPRLPTPEWVRITTRYSGIC CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEEEEECCCC GSDVGLITLHASPTTSPLVSFPFTLGHEVTGQISELGSAVDGFRVGQRVTVNPLLACAAR CCCCCEEEEECCCCCCCCEECCHHCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH GFREPCSECARGLPNRCLRFREGTIAPGIMIGFCRDTGGGWSASFVAHRAQLIPIPDQLT HHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCEEECCCCCCC DEEAVLAEPFGVALHAVLQNRPPDTATVLVLGAGIIGLLTVAALRAIGSQARILVTAKYP CCCHHHHCHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCC FQARAAERLGADLVLLGRTGPALYREIARLTGARVLRARFGRWLVQGGVDQVFDCVGSSR CHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC SVHDALTLTRAGGRVVLVGLASDPRNVDWTPIWLREVEIRGSMAYAEEELDGIRASSIAH CHHHHHEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCHHHHHHHH GVRLMAERRVELGWLVTHRFALAEYQEALATVTGKGANGVIKAVFAFSGGNRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1460002; 9384377; 8195086 [H]