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The map label for this gene is hypC [C]

Identifier: 221633842

GI number: 221633842

Start: 1880620

End: 1880895

Strand: Reverse

Name: hypC [C]

Synonym: trd_1869

Alternate gene names: 221633842

Gene position: 1880895-1880620 (Counterclockwise)

Preceding gene: 221633843

Following gene: 221633841

Centisome position: 93.9

GC content: 61.96

Gene sequence:

>276_bases
GTGTGTCTCGCGATTCCGGGGCAGGTGATTGACCTCGATACGGACTCGCGTGTCGCGCTCGTGAACGTGCTCGGGGTCCG
GCGGCGGATCAACGTCGAACTCGTGTGGGACGACGGCCTGCAAGCTGGGGATTGGGTCCTGATCCATGTCGGCTTCGCCC
TGAGCAAAGTGAGCGAGGCGGAAGCGGCAGCCCAGCTCCGTCTCCTGGAAGCACTCGGCGAAGACGCGCAAGCGATGGAA
GAAGTGCAAGGATATATCTTCGATGCGTCAGACTGA

Upstream 100 bases:

>100_bases
TCGGCACGCACCGGGGTCGGCCTCGGGGCCTGGTTGGACTGGCTCCAGCAGCAGCGAGCGCTTCAGTTGACGCAGTGGGG
AGCGAAGAAGGGAGCTGACC

Downstream 100 bases:

>100_bases
CGTTCATCCTGAACTTTGGCACTACGGAAGCTGTACCCTCGATCGGGACGGCTGTGTCACCTGTGGTGACCTCGCTGTCC
CTGTCGTGGTCGTGGCAGTG

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MCLAIPGQVIDLDTDSRVALVNVLGVRRRINVELVWDDGLQAGDWVLIHVGFALSKVSEAEAAAQLRLLEALGEDAQAME
EVQGYIFDASD

Sequences:

>Translated_91_residues
MCLAIPGQVIDLDTDSRVALVNVLGVRRRINVELVWDDGLQAGDWVLIHVGFALSKVSEAEAAAQLRLLEALGEDAQAME
EVQGYIFDASD
>Mature_91_residues
MCLAIPGQVIDLDTDSRVALVNVLGVRRRINVELVWDDGLQAGDWVLIHVGFALSKVSEAEAAAQLRLLEALGEDAQAME
EVQGYIFDASD

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 9881; Mature: 9881

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAIPGQVIDLDTDSRVALVNVLGVRRRINVELVWDDGLQAGDWVLIHVGFALSKVSEA
CEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEECHHHHHHHHH
EAAAQLRLLEALGEDAQAMEEVQGYIFDASD
HHHHHHHHHHHHCCCHHHHHHHCCEEEECCC
>Mature Secondary Structure
MCLAIPGQVIDLDTDSRVALVNVLGVRRRINVELVWDDGLQAGDWVLIHVGFALSKVSEA
CEEECCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEECHHHHHHHHH
EAAAQLRLLEALGEDAQAMEEVQGYIFDASD
HHHHHHHHHHHHCCCHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3308458 [H]