Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is gsiC [H]

Identifier: 221633814

GI number: 221633814

Start: 1850548

End: 1851468

Strand: Reverse

Name: gsiC [H]

Synonym: trd_1841

Alternate gene names: 221633814

Gene position: 1851468-1850548 (Counterclockwise)

Preceding gene: 221633820

Following gene: 221633813

Centisome position: 92.43

GC content: 65.26

Gene sequence:

>921_bases
ATGGCTCGTTACGTCGCCTACCGATTGCTGCGCGCGCTGATCACGATCTGGATCGTGGTCACGCTGGTCTTCATCGGGCT
CCGACTGTCCGGAGACCCAGCACAAGCCTTGCTCGGGCCAGAAGCTTCGAGCGAGGCAGTGGCCGCGTTGCGCCAGGCGT
GGGGGATCGACGAGCCACTCGCCGTGCAGTACACCCGCTATCTCCAGCAACTCGCCCGCGGGGACTTCGGACGCTCGCTC
CGCGATCAGCGCCCAGCGACTGTCGTCGTGCACGAACGAATCCCGAGTACGTTACGGCTGGCCAGCGCTGCCCTGGCCAT
CGCCTTGAGCGCCGGAACCGTGCTCGGCACACTGGCAGCGCTGCGAGCGGGAAGCCTTCTGGATCGCACGATCGTCGCTC
TGTCGGCGATCGGACAGGGCATCCCGAACTTCGTCCTCGGTCTGCTGCTGATTTTGCTCTTCGCGCTGCACCTCGGGTGG
TTTCCGACGTCGGGTCAACAAGGAGCAGCGAGCCTTGTGCTGCCGGCGCTCACCTTGAGCAGCTTCAGCGTCGCGAGCCT
GACGCGCTTCACGCGCTCGGCTCTGCTCGAAGTCCTGCGGGCCGATTACGTTCGCACTGCCCATGCCAAGGGCTTGCCCT
GGCGGACCGTGCTGATCGACCACATGGGGCGCAATGCTGCGCTGACCCTGGTAACGGTCATCAGCTTGCAGGTGGCAGTG
GCGATCGCGGGAGCGGTCGTGACCGAGACCGTCTTTTCTTGGCCCGGGATGGGCCAACTCTTGGCTCGAGCCGCCGAACT
GCGCGACTTCCCGGTCGTCCAGTACGGCGTTCTGCTTATCGTGGCCTCGGTGGTGTTGGTCAACCTCCTGACCGACATCC
TGTACGGCTGGCTCGATCCTCGCGTGCGGCTGGAGGCATGA

Upstream 100 bases:

>100_bases
CGACACCTCGCTCCGCAACAAGAATGCCAAAGCCGTTTTACACCGGTGCCACAGTGCAGCGCCCGTACAGGAGAAGACTC
GACCCGGAAAGGGGCGCGCG

Downstream 100 bases:

>100_bases
GCGATGGTCGTTTCGACTCCTCTCCGACGGTCCGGTTCTCGAGCAGGACTTCCCGTCGTACCCCGCCGTACCCGTGCGCG
GCCCGACTGGCCGCTGACCT

Product: putative transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MARYVAYRLLRALITIWIVVTLVFIGLRLSGDPAQALLGPEASSEAVAALRQAWGIDEPLAVQYTRYLQQLARGDFGRSL
RDQRPATVVVHERIPSTLRLASAALAIALSAGTVLGTLAALRAGSLLDRTIVALSAIGQGIPNFVLGLLLILLFALHLGW
FPTSGQQGAASLVLPALTLSSFSVASLTRFTRSALLEVLRADYVRTAHAKGLPWRTVLIDHMGRNAALTLVTVISLQVAV
AIAGAVVTETVFSWPGMGQLLARAAELRDFPVVQYGVLLIVASVVLVNLLTDILYGWLDPRVRLEA

Sequences:

>Translated_306_residues
MARYVAYRLLRALITIWIVVTLVFIGLRLSGDPAQALLGPEASSEAVAALRQAWGIDEPLAVQYTRYLQQLARGDFGRSL
RDQRPATVVVHERIPSTLRLASAALAIALSAGTVLGTLAALRAGSLLDRTIVALSAIGQGIPNFVLGLLLILLFALHLGW
FPTSGQQGAASLVLPALTLSSFSVASLTRFTRSALLEVLRADYVRTAHAKGLPWRTVLIDHMGRNAALTLVTVISLQVAV
AIAGAVVTETVFSWPGMGQLLARAAELRDFPVVQYGVLLIVASVVLVNLLTDILYGWLDPRVRLEA
>Mature_305_residues
ARYVAYRLLRALITIWIVVTLVFIGLRLSGDPAQALLGPEASSEAVAALRQAWGIDEPLAVQYTRYLQQLARGDFGRSLR
DQRPATVVVHERIPSTLRLASAALAIALSAGTVLGTLAALRAGSLLDRTIVALSAIGQGIPNFVLGLLLILLFALHLGWF
PTSGQQGAASLVLPALTLSSFSVASLTRFTRSALLEVLRADYVRTAHAKGLPWRTVLIDHMGRNAALTLVTVISLQVAVA
IAGAVVTETVFSWPGMGQLLARAAELRDFPVVQYGVLLIVASVVLVNLLTDILYGWLDPRVRLEA

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=38.562091503268, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1789965, Length=317, Percent_Identity=38.4858044164038, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787497, Length=307, Percent_Identity=33.8762214983713, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1789888, Length=307, Percent_Identity=34.5276872964169, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1787761, Length=314, Percent_Identity=36.9426751592357, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI1787550, Length=313, Percent_Identity=28.4345047923323, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788504, Length=281, Percent_Identity=29.5373665480427, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32815; Mature: 32684

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYVAYRLLRALITIWIVVTLVFIGLRLSGDPAQALLGPEASSEAVAALRQAWGIDEPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCH
AVQYTRYLQQLARGDFGRSLRDQRPATVVVHERIPSTLRLASAALAIALSAGTVLGTLAA
HHHHHHHHHHHHCCCCCCHHHHCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRAGSLLDRTIVALSAIGQGIPNFVLGLLLILLFALHLGWFPTSGQQGAASLVLPALTLS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SFSVASLTRFTRSALLEVLRADYVRTAHAKGLPWRTVLIDHMGRNAALTLVTVISLQVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
AIAGAVVTETVFSWPGMGQLLARAAELRDFPVVQYGVLLIVASVVLVNLLTDILYGWLDP
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVRLEA
CEEECC
>Mature Secondary Structure 
ARYVAYRLLRALITIWIVVTLVFIGLRLSGDPAQALLGPEASSEAVAALRQAWGIDEPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCH
AVQYTRYLQQLARGDFGRSLRDQRPATVVVHERIPSTLRLASAALAIALSAGTVLGTLAA
HHHHHHHHHHHHCCCCCCHHHHCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRAGSLLDRTIVALSAIGQGIPNFVLGLLLILLFALHLGWFPTSGQQGAASLVLPALTLS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SFSVASLTRFTRSALLEVLRADYVRTAHAKGLPWRTVLIDHMGRNAALTLVTVISLQVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
AIAGAVVTETVFSWPGMGQLLARAAELRDFPVVQYGVLLIVASVVLVNLLTDILYGWLDP
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RVRLEA
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA