Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221633784

Identifier: 221633784

GI number: 221633784

Start: 1816098

End: 1817093

Strand: Reverse

Name: 221633784

Synonym: trd_1811

Alternate gene names: NA

Gene position: 1817093-1816098 (Counterclockwise)

Preceding gene: 221633785

Following gene: 221633782

Centisome position: 90.72

GC content: 59.74

Gene sequence:

>996_bases
ATGGAACCAGGACTTTTTCTGATCCTCGCCCAAACGTGTGGTCCGACGTGCGATCCCTGGTTCGATGCGTTGCTGGCACT
CGCCACGACCGGATCACTGTTCCTGGTGACCGTTTTCGGTTTCTGGGTCAGCTTCGAACGCCTGCGAGGATTTCGGCGGA
TCCGTCGTCTCTCTACCGAGCCGATCGGGACAGTCCTGACAGGCCCATTCGACCGGTTGGTCGAACTACGAGGGCAAGCG
AAACGTGCAACGGCAGAACGCATGCTCCTGACCGACACGATGGCTGCTGCCGGTAAGAGGACAATCACGGTCACCTGGGC
GAGAAGCGTCTTCTGGAAAGATCGGTTCCGATTCCTACGTCACGAGGAATCCTTCTTGAACCAAATCGTCCTCGACGACG
GGACAGGACAGATACTCGTCGACGCATCGGACGCCCACCGGTACTGGTTGTCGAAAGCCGCCAACTGGAAGATCGAAGAG
GCGCCGGATTGGGCGCGGCAACGCTATGAGGAACTGAGGCAAAGACACGGCGATACGATCGCAAGTTGGGAAGACTCCGG
ATTTTCAGCCCGCTCGATCGAAGTCTGGGAAGAATATCTTCCGATCGGCAGCGAACTCTTCGTCGTCGGTCGCTTGCAAC
CAGCACCGGGGAATGGGAACACCGCAAATGGATCACTCGGACTCGCCACGGTCCGCGCAGAAGTTGCGAGTCTGGGTCGC
GAGTCCTCGACGGGCTACGGGTTGCTCCTCGAGGGAATCCTGGCGCTCCTCGCTGCCGCTGGTGCAGCTATAGGCCTCTC
TCGCCTCTCGTCTTGGTTCGTCGACGCATGGGCACGTTATCTCGCTGACCAACGGTCCTTGTGGGACCGGGTGTTGGAAG
GTGGCATCATGCTCGTCGTCTTGGCCGTGGCGTCATTGCTCTCGCTCGTCATGATCGTCGTGACGGGCGAGATCCTCGGC
AAAGCGATCACCCTGCGTGGCCGCAAGAGCGAGTGA

Upstream 100 bases:

>100_bases
TGCCCGGAATGCTGGGACCGCCAGCGCTGGCCGTGAGCACACGCGACAGGGGAGAGTACGGGAGTCGCGCGGATCTGGAT
GCAGCGGGATGTGGAGTCGC

Downstream 100 bases:

>100_bases
GCCGAGCACCTGAGCGAGAAGCGCTCGTTTCCCGTGCTTCGCCGGGAAGCGGCCTACTCAGGCGGGCAGCGGCACACCGT
AGCGCGTCGCGATCTCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTEPIGTVLTGPFDRLVELRGQA
KRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLRHEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEE
APDWARQRYEELRQRHGDTIASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR
ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVVLAVASLLSLVMIVVTGEILG
KAITLRGRKSE

Sequences:

>Translated_331_residues
MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTEPIGTVLTGPFDRLVELRGQA
KRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLRHEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEE
APDWARQRYEELRQRHGDTIASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR
ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVVLAVASLLSLVMIVVTGEILG
KAITLRGRKSE
>Mature_331_residues
MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTEPIGTVLTGPFDRLVELRGQA
KRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLRHEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEE
APDWARQRYEELRQRHGDTIASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR
ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVVLAVASLLSLVMIVVTGEILG
KAITLRGRKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36650; Mature: 36650

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTE
CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PIGTVLTGPFDRLVELRGQAKRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLR
CCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
HEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEEAPDWARQRYEELRQRHGDTI
HHHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR
ECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LAVASLLSLVMIVVTGEILGKAITLRGRKSE
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure
MEPGLFLILAQTCGPTCDPWFDALLALATTGSLFLVTVFGFWVSFERLRGFRRIRRLSTE
CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PIGTVLTGPFDRLVELRGQAKRATAERMLLTDTMAAAGKRTITVTWARSVFWKDRFRFLR
CCCHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHH
HEESFLNQIVLDDGTGQILVDASDAHRYWLSKAANWKIEEAPDWARQRYEELRQRHGDTI
HHHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ASWEDSGFSARSIEVWEEYLPIGSELFVVGRLQPAPGNGNTANGSLGLATVRAEVASLGR
ECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
ESSTGYGLLLEGILALLAAAGAAIGLSRLSSWFVDAWARYLADQRSLWDRVLEGGIMLVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LAVASLLSLVMIVVTGEILGKAITLRGRKSE
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA