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The map label for this gene is yisV [H]

Identifier: 221633765

GI number: 221633765

Start: 1796743

End: 1797945

Strand: Reverse

Name: yisV [H]

Synonym: trd_1792

Alternate gene names: 221633765

Gene position: 1797945-1796743 (Counterclockwise)

Preceding gene: 221633766

Following gene: 221633751

Centisome position: 89.76

GC content: 64.84

Gene sequence:

>1203_bases
GTGAGGATCGATTGGTCGACCATTTTGGCCGGGCGGGCCAGAGCGTTCCGTCCCTGCATCCGGACGGACTTTTCCTCGCT
CCCCACACCACCCGATGTCATCCATTTCACCGGCGGGGCACCCCCGCTCGAGTGTTTACCGGCCGAGCCGCTCGGCGAAG
CGCTCGCCCGAGCCTGGCGAACGGAACCGACTGGACTCTGGTACGGAGAGACCGAAGGTCACCGGCCATTGCGTGAAGCC
ATCGCTGCACGATTGGCGCAGCGAGGAGCGACGGTGGACCCGGATACCATCTTGATCACACAGGGTGCGCAGCAAGCGAT
CGATCTGGTCGCGCGCGCGTTGCTCGAACCGGGGGATCGGGTCCTCGTCGAGGGACCGACGTATTTCGGTGCCCTGCAGG
TCTTCGAGCCATATGACGTTCGGATCGAGGCGATTCCCCTGGACGAGGAAGGAGTGGTCCTCGACGAATTGGCAGCAGCG
CTGGCCCGTTCACCGCGCCCCAAGCTCTTCTACACCGTTCCGACTTTCCAGAACCCAGCCGGTGTCACGATGACCCTCGA
GCGGCGCCGCGCGGTCGTGGAGCTGGCAGCCCAGTATGGCGTACCGATCGTCGAGGATGACCCGTACGGCGATCTGTGGT
ACGAAACACCGCCACCGCCGCCGTTGCGCGCCTTCTGGGACGAGGTGCTCTCGCTGGGGAGTTTTTCGAAGACGCTGGCT
CCTGGCTTGCGTGTGGGCTGGTTAGTCGCGCCACCGCACCTGATGAAGCTCTTGATCGACGCCAAAGAAGCAGCCGATAT
CCAGTCGGACCGCTTGCTCCAGCGAGCGATCACGGCCGTCATCACGAGCCCCTGGTACGAGGAACATCTGGCTCGAGCGC
GCCGGATCTATGCGGAGCGTTGCCAGCTGCTGGCCGAAGCACTCGCGCGCGAACTCGGGGAATGCGCAGCGTGGTCGTTG
CCGAGGGGCGGGTTCTTCCTCTGGATCACCCTACGCGGCGTGGAAGAGAGTGCCAGTCTGCTGCCACATTGCGCTGCTGC
TGGGGTGACCTTCGTGCCCGGATCGGAGTTCTACCCTGATCATCGACCGAGCCCGAGCCTTCGCTTGGGCTTCACCACGC
TCTCCCGCGAGGATCTCCTGAAGGGGGCAGAGCGTTTGGGGCGCGTCCTCCGGGAGACGATCGTCGAGGTGAGCGGGCGC
TGA

Upstream 100 bases:

>100_bases
GCGGTATCCGCGTCGTCGGTACCCGCTCGAAAGGACGCAACAACAAGCGGATCGAGATCACCCTCGTCGATCAGGCCGAG
AACGAGCGGACGGAGGGATC

Downstream 100 bases:

>100_bases
GGCTGCCCGCCGTGGTCGCAAGCTCCTCAGCCCGCTACCAGACACGACAGATCAATCCTTTCAAATACTCCCCCTCGGGA
AAGGAGAGCCGGATGGGATG

Product: class I aminotransferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MRIDWSTILAGRARAFRPCIRTDFSSLPTPPDVIHFTGGAPPLECLPAEPLGEALARAWRTEPTGLWYGETEGHRPLREA
IAARLAQRGATVDPDTILITQGAQQAIDLVARALLEPGDRVLVEGPTYFGALQVFEPYDVRIEAIPLDEEGVVLDELAAA
LARSPRPKLFYTVPTFQNPAGVTMTLERRRAVVELAAQYGVPIVEDDPYGDLWYETPPPPPLRAFWDEVLSLGSFSKTLA
PGLRVGWLVAPPHLMKLLIDAKEAADIQSDRLLQRAITAVITSPWYEEHLARARRIYAERCQLLAEALARELGECAAWSL
PRGGFFLWITLRGVEESASLLPHCAAAGVTFVPGSEFYPDHRPSPSLRLGFTTLSREDLLKGAERLGRVLRETIVEVSGR

Sequences:

>Translated_400_residues
MRIDWSTILAGRARAFRPCIRTDFSSLPTPPDVIHFTGGAPPLECLPAEPLGEALARAWRTEPTGLWYGETEGHRPLREA
IAARLAQRGATVDPDTILITQGAQQAIDLVARALLEPGDRVLVEGPTYFGALQVFEPYDVRIEAIPLDEEGVVLDELAAA
LARSPRPKLFYTVPTFQNPAGVTMTLERRRAVVELAAQYGVPIVEDDPYGDLWYETPPPPPLRAFWDEVLSLGSFSKTLA
PGLRVGWLVAPPHLMKLLIDAKEAADIQSDRLLQRAITAVITSPWYEEHLARARRIYAERCQLLAEALARELGECAAWSL
PRGGFFLWITLRGVEESASLLPHCAAAGVTFVPGSEFYPDHRPSPSLRLGFTTLSREDLLKGAERLGRVLRETIVEVSGR
>Mature_400_residues
MRIDWSTILAGRARAFRPCIRTDFSSLPTPPDVIHFTGGAPPLECLPAEPLGEALARAWRTEPTGLWYGETEGHRPLREA
IAARLAQRGATVDPDTILITQGAQQAIDLVARALLEPGDRVLVEGPTYFGALQVFEPYDVRIEAIPLDEEGVVLDELAAA
LARSPRPKLFYTVPTFQNPAGVTMTLERRRAVVELAAQYGVPIVEDDPYGDLWYETPPPPPLRAFWDEVLSLGSFSKTLA
PGLRVGWLVAPPHLMKLLIDAKEAADIQSDRLLQRAITAVITSPWYEEHLARARRIYAERCQLLAEALARELGECAAWSL
PRGGFFLWITLRGVEESASLLPHCAAAGVTFVPGSEFYPDHRPSPSLRLGFTTLSREDLLKGAERLGRVLRETIVEVSGR

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=316, Percent_Identity=31.9620253164557, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI33469970, Length=316, Percent_Identity=31.9620253164557, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI95147551, Length=258, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI169881279, Length=258, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787710, Length=370, Percent_Identity=32.4324324324324, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1790797, Length=378, Percent_Identity=32.2751322751323, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1788722, Length=314, Percent_Identity=26.7515923566879, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567663, Length=278, Percent_Identity=22.6618705035971, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321000, Length=432, Percent_Identity=25.6944444444444, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321236, Length=361, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21356535, Length=397, Percent_Identity=27.455919395466, Blast_Score=141, Evalue=7e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 44137; Mature: 44137

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDWSTILAGRARAFRPCIRTDFSSLPTPPDVIHFTGGAPPLECLPAEPLGEALARAWR
CCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHC
TEPTGLWYGETEGHRPLREAIAARLAQRGATVDPDTILITQGAQQAIDLVARALLEPGDR
CCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCE
VLVEGPTYFGALQVFEPYDVRIEAIPLDEEGVVLDELAAALARSPRPKLFYTVPTFQNPA
EEEECCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCC
GVTMTLERRRAVVELAAQYGVPIVEDDPYGDLWYETPPPPPLRAFWDEVLSLGSFSKTLA
CCEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHC
PGLRVGWLVAPPHLMKLLIDAKEAADIQSDRLLQRAITAVITSPWYEEHLARARRIYAER
CCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CQLLAEALARELGECAAWSLPRGGFFLWITLRGVEESASLLPHCAAAGVTFVPGSEFYPD
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCEEECCCCCCCCC
HRPSPSLRLGFTTLSREDLLKGAERLGRVLRETIVEVSGR
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIDWSTILAGRARAFRPCIRTDFSSLPTPPDVIHFTGGAPPLECLPAEPLGEALARAWR
CCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHC
TEPTGLWYGETEGHRPLREAIAARLAQRGATVDPDTILITQGAQQAIDLVARALLEPGDR
CCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCE
VLVEGPTYFGALQVFEPYDVRIEAIPLDEEGVVLDELAAALARSPRPKLFYTVPTFQNPA
EEEECCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCC
GVTMTLERRRAVVELAAQYGVPIVEDDPYGDLWYETPPPPPLRAFWDEVLSLGSFSKTLA
CCEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHC
PGLRVGWLVAPPHLMKLLIDAKEAADIQSDRLLQRAITAVITSPWYEEHLARARRIYAER
CCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
CQLLAEALARELGECAAWSLPRGGFFLWITLRGVEESASLLPHCAAAGVTFVPGSEFYPD
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCEEECCCCCCCCC
HRPSPSLRLGFTTLSREDLLKGAERLGRVLRETIVEVSGR
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]