Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633748

Identifier: 221633748

GI number: 221633748

Start: 1777630

End: 1778034

Strand: Reverse

Name: 221633748

Synonym: trd_1775

Alternate gene names: NA

Gene position: 1778034-1777630 (Counterclockwise)

Preceding gene: 221633751

Following gene: 221633747

Centisome position: 88.77

GC content: 63.95

Gene sequence:

>405_bases
GTGCCGGGTATGGCGCAGCCGGAGGCGAACAGGACACAGCACCACGCACTGACCTGGCGCACTCGACCACGGAGCGGGGA
TCGGTACCGAGCGTGTTTCCGAGTCTCAGTGTGCCGACCAGGCACAGTGCCAGCATGGGACAGCCAGCCGCTGTGGAGAA
TGTCGGCCCACCTTGTGGATAACTCCTGCCACGTTTCCACAACAGCAGCCGTGTGGTGTGGGCGAGTCAGCGGCAGCCTG
TGGTCTATCGGTGGAGGACGCTGGTCCTGTGCCGGCGGCGCTCCGGTTTCGCCCACAGTCGGCTCTCGCTCGTCCGCTTC
TTTCCACACCGACGTGCCTCGTTTTTCGCCGGCTGCAAAGGCGATTCACCACTTTTCCACGCTATCCTCGGCCCGACGAC
TATGA

Upstream 100 bases:

>100_bases
GGAAGTCGACCGAACCGGCGAGGCAGGCACCTGGCTCGTCGGGCTGGAGCCGGAGCACCCCAGGCTGACCCGCGTCTCGT
CCAGGGTGGAGAGCAGCAGC

Downstream 100 bases:

>100_bases
CGGTTTCTCTCTTGGGCTGATATCCCGGGAGAGCGAGGAACACGGGAGACACACGTGCGACAATGGTGGAGATGAGCGAT
CGGAGCGTGGAGGAAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVDNSCHVSTTAAVWCGRVSGSL
WSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAKAIHHFSTLSSARRL

Sequences:

>Translated_134_residues
MPGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVDNSCHVSTTAAVWCGRVSGSL
WSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAKAIHHFSTLSSARRL
>Mature_133_residues
PGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVDNSCHVSTTAAVWCGRVSGSLW
SIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAKAIHHFSTLSSARRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14556; Mature: 14424

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVD
CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHC
NSCHVSTTAAVWCGRVSGSLWSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAK
CCCCCCHHHHEEECCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AIHHFSTLSSARRL
HHHHHHHHHHHHCC
>Mature Secondary Structure 
PGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVD
CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHC
NSCHVSTTAAVWCGRVSGSLWSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAK
CCCCCCHHHHEEECCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AIHHFSTLSSARRL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA