| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633748
Identifier: 221633748
GI number: 221633748
Start: 1777630
End: 1778034
Strand: Reverse
Name: 221633748
Synonym: trd_1775
Alternate gene names: NA
Gene position: 1778034-1777630 (Counterclockwise)
Preceding gene: 221633751
Following gene: 221633747
Centisome position: 88.77
GC content: 63.95
Gene sequence:
>405_bases GTGCCGGGTATGGCGCAGCCGGAGGCGAACAGGACACAGCACCACGCACTGACCTGGCGCACTCGACCACGGAGCGGGGA TCGGTACCGAGCGTGTTTCCGAGTCTCAGTGTGCCGACCAGGCACAGTGCCAGCATGGGACAGCCAGCCGCTGTGGAGAA TGTCGGCCCACCTTGTGGATAACTCCTGCCACGTTTCCACAACAGCAGCCGTGTGGTGTGGGCGAGTCAGCGGCAGCCTG TGGTCTATCGGTGGAGGACGCTGGTCCTGTGCCGGCGGCGCTCCGGTTTCGCCCACAGTCGGCTCTCGCTCGTCCGCTTC TTTCCACACCGACGTGCCTCGTTTTTCGCCGGCTGCAAAGGCGATTCACCACTTTTCCACGCTATCCTCGGCCCGACGAC TATGA
Upstream 100 bases:
>100_bases GGAAGTCGACCGAACCGGCGAGGCAGGCACCTGGCTCGTCGGGCTGGAGCCGGAGCACCCCAGGCTGACCCGCGTCTCGT CCAGGGTGGAGAGCAGCAGC
Downstream 100 bases:
>100_bases CGGTTTCTCTCTTGGGCTGATATCCCGGGAGAGCGAGGAACACGGGAGACACACGTGCGACAATGGTGGAGATGAGCGAT CGGAGCGTGGAGGAAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVDNSCHVSTTAAVWCGRVSGSL WSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAKAIHHFSTLSSARRL
Sequences:
>Translated_134_residues MPGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVDNSCHVSTTAAVWCGRVSGSL WSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAKAIHHFSTLSSARRL >Mature_133_residues PGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVDNSCHVSTTAAVWCGRVSGSLW SIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAKAIHHFSTLSSARRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14556; Mature: 14424
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVD CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHC NSCHVSTTAAVWCGRVSGSLWSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAK CCCCCCHHHHEEECCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AIHHFSTLSSARRL HHHHHHHHHHHHCC >Mature Secondary Structure PGMAQPEANRTQHHALTWRTRPRSGDRYRACFRVSVCRPGTVPAWDSQPLWRMSAHLVD CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHC NSCHVSTTAAVWCGRVSGSLWSIGGGRWSCAGGAPVSPTVGSRSSASFHTDVPRFSPAAK CCCCCCHHHHEEECCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AIHHFSTLSSARRL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA