| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633728
Identifier: 221633728
GI number: 221633728
Start: 1760861
End: 1761256
Strand: Reverse
Name: 221633728
Synonym: trd_1755
Alternate gene names: NA
Gene position: 1761256-1760861 (Counterclockwise)
Preceding gene: 221633729
Following gene: 221633725
Centisome position: 87.93
GC content: 65.4
Gene sequence:
>396_bases ATGCTCTGGATCGGTTCCTGGCTCCGCACCGCGGTGCTGGTCGCTCTCGGCTTCGCGATCGCGCTCTATTTCGTCGTCGC TTTCGGTCAACAAGCCTGGCGGGCCCGGCAGCTCGAGATGCAGGTGGCTGAACGCCGAGCCGCTCTGGCTCGACTCGTGA CCGAGCGAGACACACTCGCCAGCCAGCTGGCCGATCTGCAGGGGGAAAACGATCGTGCGTACGTCGAACGGACAGCTCGA CGCGAGTTGAACCTGACGTACCCCGGTGAAACGGTCCTCTTCGTCCAGTGGGAGCCAGCGTCTCCTGGCGCGAGTCCCGC ACTGTCCACACCGACACCCGGGCCCGAGCCGAATTGGGAACGCTGGCTCGAGGTCCTGCGACTACCTCGACCCTGA
Upstream 100 bases:
>100_bases GCCATTCGACGAGCCCACGCTCTTGCGGGTCGCCCACGCCTACGAGCAGGCCACCGACTGGCATACCCGGTGGCCACCCC TGGTGTTCGGGGGCTGAGCG
Downstream 100 bases:
>100_bases GTCGCTCAAGCCTCGTGAAGCGAGGCGCGCTCGACCACGAGGGGTTGCTGGAGCACGCCGTTGGCGAGCGCGAAGATCGC CGCCTGTGTCCGATCCTTCA
Product: Septum formation initiator family
Products: NA
Alternate protein names: Septum Formation Initiator
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLASQLADLQGENDRAYVERTAR RELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWERWLEVLRLPRP
Sequences:
>Translated_131_residues MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLASQLADLQGENDRAYVERTAR RELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWERWLEVLRLPRP >Mature_131_residues MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLASQLADLQGENDRAYVERTAR RELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWERWLEVLRLPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14816; Mature: 14816
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLADLQGENDRAYVERTARRELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWE HHHHHHCCCCCHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHH RWLEVLRLPRP HHHHHHHCCCC >Mature Secondary Structure MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQLADLQGENDRAYVERTARRELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWE HHHHHHCCCCCHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHH RWLEVLRLPRP HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA