Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633728

Identifier: 221633728

GI number: 221633728

Start: 1760861

End: 1761256

Strand: Reverse

Name: 221633728

Synonym: trd_1755

Alternate gene names: NA

Gene position: 1761256-1760861 (Counterclockwise)

Preceding gene: 221633729

Following gene: 221633725

Centisome position: 87.93

GC content: 65.4

Gene sequence:

>396_bases
ATGCTCTGGATCGGTTCCTGGCTCCGCACCGCGGTGCTGGTCGCTCTCGGCTTCGCGATCGCGCTCTATTTCGTCGTCGC
TTTCGGTCAACAAGCCTGGCGGGCCCGGCAGCTCGAGATGCAGGTGGCTGAACGCCGAGCCGCTCTGGCTCGACTCGTGA
CCGAGCGAGACACACTCGCCAGCCAGCTGGCCGATCTGCAGGGGGAAAACGATCGTGCGTACGTCGAACGGACAGCTCGA
CGCGAGTTGAACCTGACGTACCCCGGTGAAACGGTCCTCTTCGTCCAGTGGGAGCCAGCGTCTCCTGGCGCGAGTCCCGC
ACTGTCCACACCGACACCCGGGCCCGAGCCGAATTGGGAACGCTGGCTCGAGGTCCTGCGACTACCTCGACCCTGA

Upstream 100 bases:

>100_bases
GCCATTCGACGAGCCCACGCTCTTGCGGGTCGCCCACGCCTACGAGCAGGCCACCGACTGGCATACCCGGTGGCCACCCC
TGGTGTTCGGGGGCTGAGCG

Downstream 100 bases:

>100_bases
GTCGCTCAAGCCTCGTGAAGCGAGGCGCGCTCGACCACGAGGGGTTGCTGGAGCACGCCGTTGGCGAGCGCGAAGATCGC
CGCCTGTGTCCGATCCTTCA

Product: Septum formation initiator family

Products: NA

Alternate protein names: Septum Formation Initiator

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLASQLADLQGENDRAYVERTAR
RELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWERWLEVLRLPRP

Sequences:

>Translated_131_residues
MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLASQLADLQGENDRAYVERTAR
RELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWERWLEVLRLPRP
>Mature_131_residues
MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLASQLADLQGENDRAYVERTAR
RELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWERWLEVLRLPRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14816; Mature: 14816

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLADLQGENDRAYVERTARRELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWE
HHHHHHCCCCCHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHH
RWLEVLRLPRP
HHHHHHHCCCC
>Mature Secondary Structure
MLWIGSWLRTAVLVALGFAIALYFVVAFGQQAWRARQLEMQVAERRAALARLVTERDTLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLADLQGENDRAYVERTARRELNLTYPGETVLFVQWEPASPGASPALSTPTPGPEPNWE
HHHHHHCCCCCHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHH
RWLEVLRLPRP
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA