| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is pyk [H]
Identifier: 221633701
GI number: 221633701
Start: 1732620
End: 1734059
Strand: Reverse
Name: pyk [H]
Synonym: trd_1728
Alternate gene names: 221633701
Gene position: 1734059-1732620 (Counterclockwise)
Preceding gene: 221633705
Following gene: 221633700
Centisome position: 86.57
GC content: 65.62
Gene sequence:
>1440_bases GTGGCGGAAGAGCGAGCGTCGTGCTGGCGACGTCGCGCCAAGATCGTGGCAACGATCGGTCCGGCCTCCTGGAGTCCGCC GGTTTTGGACCAGCTGATCGCCGCTGGTGTCGATGTCTTTCGGGTGAACGCTGCGCACAACTCGCCGGAGGAACGCCGGC CTATCGTGGCTGACCTGCGAGCTGCTGCTGACCGGGCAGGGCGACCGATCGCCATCCTGCAGGATTTGGCGAGTTGGAAG CCACGGACTGGTCCCCTGGAGGGTGATTCATTCCGCCTGATTCGCGACACGCGTGTGCGGATCGTTCCGGGCAGTGAGCC GCTCTCGCCGGAGCGGCTCAGTATCGACGATGCAGAACTGGTCGCTCAGCTGCGGCCCGGGCATCGGATCCTGATCAGCG ATGGGTTGATCGAGCTCGTCGTCGAGTCGCGCGCGGGAGACGAGCTGATCGCTCGCGTCCTGCGTGGTGGCCAGATCCGG GGGCGACAGGGCGTTGCCGTACCAGGGGTCCTCGGGCGTCCTTTCCGATTGAGCGAACGCGATCGAGCCGATATCGCCTT CGCCGCCGAGCACGAGCTGGAGTACATCGGGGTGAGCTTCGTCACGGGGCCGGATGATCTCCGGTCGGTGCGAGCGATCC TGCGCGAGTGTGGCGGGCGCGCTCGGCTCGTCGCGAAAATCGAGCGTCCCGAGGCGCTGGCAGCGATCCGCGAGATCGCG CGCGAGAGCGACGCTGTCATGGTCGCTCGGGGCGATCTCGGTGTTCAGCTGCCGCCGGAGGAAGTGCCCATCGCGCAAAA GCGGATCATCCGCGTTGCCCGTGCCTTCGGTATTCCCAGCATTATCGCCACACAGATGCTGGAATCGATGACGACGCAGC CGATCCCGACTCGCGCGGAGGTCAGCGACGTGGCGAATGCTGTTCTCGAGGGAGCTGACGCTCTGATGCTCAGTGCGGAA ACCGCGACTGGTCAGTATCCGGTCGAGGCGGTCGAGATGATGCATCGAATCATCGTCGCCACCGAGCAGCAGCTGACCCC TGCACCGGTTCCCGAAGAGGAAGAGCCGACGACGATCGCTGCGACGATCGCGCGCACCGCCACCGATCTCGCTCGACGTT GGCGAGCGGTTCGCACGATCGTGGCGATCACGCGAAGCGGGTTTACCGCTCGGGAAGTGGCCCGCGAGCGACCGGTCGCA CCGATCGTCGCGGTGACCTGTGATCCCATGGTTGCCCGGCAACTCTCCCTGGTTTGGGGGATTGTGCCGCTCGCACTTCC TTCGTTCGCGGAAACCAGCGAGGAGTTGATCGAGCAGGCAGCAGGGGCAGCGCGTGCGAGCGGGCTCGTCAGGGGCGGTG ATCACGCCGTCTTCATTACGAGTCTCCGCTATTTTCCCGAGCCCGGGCACGCCGATACGCTCCATCTCCGCCAACTCTGA
Upstream 100 bases:
>100_bases GATCGAGAGCGGTGCCGGAGAGCGCGCATTGCCTGCTAGCGTCTTGCGGGCTATCCTCGTTTGCTCGTCGTGTCGGGCCG GGGGAGCGAGGAGGTGTCTC
Downstream 100 bases:
>100_bases ACCCAGGGGCTGCTGCCCCGCGAGCAGCTCTGATGGTCGCGCTGCTCTCGCTGTGTGCCGAGAAGGCTGGGTATCGGCCG AGTGATCCTGCCAGAGCATG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAEERASCWRRRAKIVATIGPASWSPPVLDQLIAAGVDVFRVNAAHNSPEERRPIVADLRAAADRAGRPIAILQDLASWK PRTGPLEGDSFRLIRDTRVRIVPGSEPLSPERLSIDDAELVAQLRPGHRILISDGLIELVVESRAGDELIARVLRGGQIR GRQGVAVPGVLGRPFRLSERDRADIAFAAEHELEYIGVSFVTGPDDLRSVRAILRECGGRARLVAKIERPEALAAIREIA RESDAVMVARGDLGVQLPPEEVPIAQKRIIRVARAFGIPSIIATQMLESMTTQPIPTRAEVSDVANAVLEGADALMLSAE TATGQYPVEAVEMMHRIIVATEQQLTPAPVPEEEEPTTIAATIARTATDLARRWRAVRTIVAITRSGFTAREVARERPVA PIVAVTCDPMVARQLSLVWGIVPLALPSFAETSEELIEQAAGAARASGLVRGGDHAVFITSLRYFPEPGHADTLHLRQL
Sequences:
>Translated_479_residues MAEERASCWRRRAKIVATIGPASWSPPVLDQLIAAGVDVFRVNAAHNSPEERRPIVADLRAAADRAGRPIAILQDLASWK PRTGPLEGDSFRLIRDTRVRIVPGSEPLSPERLSIDDAELVAQLRPGHRILISDGLIELVVESRAGDELIARVLRGGQIR GRQGVAVPGVLGRPFRLSERDRADIAFAAEHELEYIGVSFVTGPDDLRSVRAILRECGGRARLVAKIERPEALAAIREIA RESDAVMVARGDLGVQLPPEEVPIAQKRIIRVARAFGIPSIIATQMLESMTTQPIPTRAEVSDVANAVLEGADALMLSAE TATGQYPVEAVEMMHRIIVATEQQLTPAPVPEEEEPTTIAATIARTATDLARRWRAVRTIVAITRSGFTAREVARERPVA PIVAVTCDPMVARQLSLVWGIVPLALPSFAETSEELIEQAAGAARASGLVRGGDHAVFITSLRYFPEPGHADTLHLRQL >Mature_478_residues AEERASCWRRRAKIVATIGPASWSPPVLDQLIAAGVDVFRVNAAHNSPEERRPIVADLRAAADRAGRPIAILQDLASWKP RTGPLEGDSFRLIRDTRVRIVPGSEPLSPERLSIDDAELVAQLRPGHRILISDGLIELVVESRAGDELIARVLRGGQIRG RQGVAVPGVLGRPFRLSERDRADIAFAAEHELEYIGVSFVTGPDDLRSVRAILRECGGRARLVAKIERPEALAAIREIAR ESDAVMVARGDLGVQLPPEEVPIAQKRIIRVARAFGIPSIIATQMLESMTTQPIPTRAEVSDVANAVLEGADALMLSAET ATGQYPVEAVEMMHRIIVATEQQLTPAPVPEEEEPTTIAATIARTATDLARRWRAVRTIVAITRSGFTAREVARERPVAP IVAVTCDPMVARQLSLVWGIVPLALPSFAETSEELIEQAAGAARASGLVRGGDHAVFITSLRYFPEPGHADTLHLRQL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=486, Percent_Identity=35.3909465020576, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI33286420, Length=486, Percent_Identity=35.3909465020576, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI33286418, Length=485, Percent_Identity=35.4639175257732, Blast_Score=268, Evalue=9e-72, Organism=Homo sapiens, GI32967597, Length=496, Percent_Identity=36.2903225806452, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI10835121, Length=496, Percent_Identity=36.2903225806452, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=32.6388888888889, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=32.6388888888889, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=28.5106382978723, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=28.5106382978723, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=26.6355140186916, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1787965, Length=462, Percent_Identity=35.0649350649351, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1788160, Length=470, Percent_Identity=36.8085106382979, Blast_Score=241, Evalue=6e-65, Organism=Caenorhabditis elegans, GI17544584, Length=468, Percent_Identity=36.3247863247863, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI71984406, Length=471, Percent_Identity=37.5796178343949, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI17506831, Length=471, Percent_Identity=37.5796178343949, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI17506829, Length=471, Percent_Identity=37.5796178343949, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI71984413, Length=471, Percent_Identity=37.5796178343949, Blast_Score=259, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6319279, Length=485, Percent_Identity=32.7835051546392, Blast_Score=242, Evalue=9e-65, Organism=Saccharomyces cerevisiae, GI6324923, Length=484, Percent_Identity=31.6115702479339, Blast_Score=211, Evalue=3e-55, Organism=Drosophila melanogaster, GI24648964, Length=476, Percent_Identity=35.9243697478992, Blast_Score=267, Evalue=1e-71, Organism=Drosophila melanogaster, GI28571814, Length=476, Percent_Identity=35.9243697478992, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI24648966, Length=407, Percent_Identity=37.1007371007371, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24581235, Length=472, Percent_Identity=30.5084745762712, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI24646914, Length=260, Percent_Identity=37.6923076923077, Blast_Score=164, Evalue=1e-40,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51977; Mature: 51846
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEERASCWRRRAKIVATIGPASWSPPVLDQLIAAGVDVFRVNAAHNSPEERRPIVADLR CCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHCCCHHHHHH AAADRAGRPIAILQDLASWKPRTGPLEGDSFRLIRDTRVRIVPGSEPLSPERLSIDDAEL HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCHHHH VAQLRPGHRILISDGLIELVVESRAGDELIARVLRGGQIRGRQGVAVPGVLGRPFRLSER HHHCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DRADIAFAAEHELEYIGVSFVTGPDDLRSVRAILRECGGRARLVAKIERPEALAAIREIA CCCCEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH RESDAVMVARGDLGVQLPPEEVPIAQKRIIRVARAFGIPSIIATQMLESMTTQPIPTRAE CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH VSDVANAVLEGADALMLSAETATGQYPVEAVEMMHRIIVATEQQLTPAPVPEEEEPTTIA HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH ATIARTATDLARRWRAVRTIVAITRSGFTAREVARERPVAPIVAVTCDPMVARQLSLVWG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH IVPLALPSFAETSEELIEQAAGAARASGLVRGGDHAVFITSLRYFPEPGHADTLHLRQL HHHHHCCCHHHHHHHHHHHHHCHHHHCCCEECCCCEEEEEEECCCCCCCCCCCEEECCC >Mature Secondary Structure AEERASCWRRRAKIVATIGPASWSPPVLDQLIAAGVDVFRVNAAHNSPEERRPIVADLR CCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHCCCHHHHHH AAADRAGRPIAILQDLASWKPRTGPLEGDSFRLIRDTRVRIVPGSEPLSPERLSIDDAEL HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCHHHH VAQLRPGHRILISDGLIELVVESRAGDELIARVLRGGQIRGRQGVAVPGVLGRPFRLSER HHHCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DRADIAFAAEHELEYIGVSFVTGPDDLRSVRAILRECGGRARLVAKIERPEALAAIREIA CCCCEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH RESDAVMVARGDLGVQLPPEEVPIAQKRIIRVARAFGIPSIIATQMLESMTTQPIPTRAE CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHH VSDVANAVLEGADALMLSAETATGQYPVEAVEMMHRIIVATEQQLTPAPVPEEEEPTTIA HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH ATIARTATDLARRWRAVRTIVAITRSGFTAREVARERPVAPIVAVTCDPMVARQLSLVWG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH IVPLALPSFAETSEELIEQAAGAARASGLVRGGDHAVFITSLRYFPEPGHADTLHLRQL HHHHHCCCHHHHHHHHHHHHHCHHHHCCCEECCCCEEEEEEECCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8436141; 1447787 [H]