Click here to switch to the map view.

The map label for this gene is spoVS [H]

Identifier: 221633700

GI number: 221633700

Start: 1731711

End: 1732109

Strand: Reverse

Name: spoVS [H]

Synonym: trd_1727

Alternate gene names: 221633700

Gene position: 1732109-1731711 (Counterclockwise)

Preceding gene: 221633701

Following gene: 221633699

Centisome position: 86.48

GC content: 65.16

Gene sequence:

>399_bases
ATGGAGCGCTTCTTCAGCAAACTGGATTTGCGCGAAATCAAGATCGGGACCGAAGCGAGTTTCCCGCCCGAGGAGGAGGC
GAATCAGGGTCCGGCGCGTTCGAGCGCGCAAGGGAGTGGTGGGCAGCGTCCGCGCCGCAGCGAAGTGCTCAAGGTTTCGG
CTCGCTCGCGCCCGAGTGCCGTCGCTGGTGCGATCGCCGGTGTCGTCCGTGAAGTCGGGCGTGCTGAAGTGCAGGCGATC
GGTGCTGGCGCGGCCAACCAGGCGATCAAGGCGGTGGCGATCGCCCGCGATTACCTCGCGGAATCCGGTATCGATGCGGT
CTGCCTTCCCTCGTTCATCACGGTGACCATCGGGAACGAGGATCGCACCGCGATCCGCTTGATCGTGGAACCGCGCTGA

Upstream 100 bases:

>100_bases
AGGAGTGGGGACAGCGCGAAGCGTCGGACACGCTGCTCGGAAACGGTATCAGGCTCAGCGACAAGCGTGGCAGTGACCCA
CATCCATCGGAGGAGACAGC

Downstream 100 bases:

>100_bases
GAACTCGCTGCCCCCAGCCAGGACTGGCTGGGGGCAGTTCGTTTTCCCGCTCATGGGTACGATCGACCTTCACACGCACA
CGACAGCGTCGGATGGCATC

Product: spoVS-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MERFFSKLDLREIKIGTEASFPPEEEANQGPARSSAQGSGGQRPRRSEVLKVSARSRPSAVAGAIAGVVREVGRAEVQAI
GAGAANQAIKAVAIARDYLAESGIDAVCLPSFITVTIGNEDRTAIRLIVEPR

Sequences:

>Translated_132_residues
MERFFSKLDLREIKIGTEASFPPEEEANQGPARSSAQGSGGQRPRRSEVLKVSARSRPSAVAGAIAGVVREVGRAEVQAI
GAGAANQAIKAVAIARDYLAESGIDAVCLPSFITVTIGNEDRTAIRLIVEPR
>Mature_132_residues
MERFFSKLDLREIKIGTEASFPPEEEANQGPARSSAQGSGGQRPRRSEVLKVSARSRPSAVAGAIAGVVREVGRAEVQAI
GAGAANQAIKAVAIARDYLAESGIDAVCLPSFITVTIGNEDRTAIRLIVEPR

Specific function: Induced early in sporulation under the control of sigma- H. Interferes with sporulation at an early stage. Seems to play a positive role in allowing cells to progress beyond stage V of sporulation [H]

COG id: COG2359

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007347
- ProDom:   PD061837 [H]

Pfam domain/function: PF04232 SpoVS [H]

EC number: NA

Molecular weight: Translated: 13930; Mature: 13930

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFFSKLDLREIKIGTEASFPPEEEANQGPARSSAQGSGGQRPRRSEVLKVSARSRPSA
CCHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCHH
VAGAIAGVVREVGRAEVQAIGAGAANQAIKAVAIARDYLAESGIDAVCLPSFITVTIGNE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCC
DRTAIRLIVEPR
CCEEEEEEEECC
>Mature Secondary Structure
MERFFSKLDLREIKIGTEASFPPEEEANQGPARSSAQGSGGQRPRRSEVLKVSARSRPSA
CCHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCHH
VAGAIAGVVREVGRAEVQAIGAGAANQAIKAVAIARDYLAESGIDAVCLPSFITVTIGNE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCC
DRTAIRLIVEPR
CCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559352; 9384377 [H]