Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is ubiE [C]

Identifier: 221633495

GI number: 221633495

Start: 1497689

End: 1498339

Strand: Reverse

Name: ubiE [C]

Synonym: trd_1517

Alternate gene names: 221633495

Gene position: 1498339-1497689 (Counterclockwise)

Preceding gene: 221633496

Following gene: 221633494

Centisome position: 74.8

GC content: 68.97

Gene sequence:

>651_bases
GTGCGACGTCGGTGGTTGGTCGTCGGCATCTTTGCGCTCGGGATCGGTCTCGGTTGGGTCCTCGCCCGGCGGCGACCCTT
CTCGGCGCGGCTCGCCTGGTTCCTGACGCTGCCCGGACCGCGTGCGATCGCCCGGCCCGAAGAGCTGGTGGCGCTCCTCG
ACCTGCAACCAGCAATGTACCTCCTCGATGCGGGTGCCGGTCCCGGTCGCTTGACCATCCCGCTCGCGGAAGTCGTCGGG
CCGACAGGCTCGGTCACAGCGGTCGATGTCCAGCCGCGGATGCTGGAGTACATCCGGCAGCGGGCAGCCGAGCGCGGGCT
GACGAACGTCCGACTACTCCTGGCGGAACTCGGTCGAGGGACACTGGCAGCCCTCGGGCCAGAGACGTACGATCGCGCGT
TGCTCGTGCACGTGCTCGGCGAAACCGACGATCCCGCTGCGACACTCCGCGAGCTCGCGGCTGTGCTCCGGCCCGGCGGG
CGGCTGGCGGTCATCGAGCACATCGGTGATCCGCATTACGTGCGGTACGCGCGCGTGCGCGAGCTGGGCGAAGCAGCCGG
GTTGCGTCTCCTCCAGGAGCGGCGATTTCTTTTCGGTCATACGACGGTCTGGGAGAAACCACACGACGGTGCGACGAAGG
GAGCGGCGTGA

Upstream 100 bases:

>100_bases
GCGGCCGGCCAGGCGGTGCAAGCGATGAATATCCGGCTCGGTTTCCCCGAGACGTTGGGTCTGGAGTTCCCCGGTCTCCA
CCCGCTGTGAGGACAGAAGC

Downstream 100 bases:

>100_bases
CAGCGATGCTGGTGGTGAAACTCGGTGGGAGTGCAGGTATCGATCCGGCGTTGACGCTCGACGATTTGGCGGCCCTCTGG
CCGGAGCACCGGATCGTGTT

Product: hypothetical protein

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: SAM-Dependent Methyltransferase; UbiE Family Methyltransferase; Methyltransferase; Demethylmenaquinone Methyltransferase; Menaquinone Biosynthesis Methyltransferase; UbiE/COQ5 Methyltransferase; 2-Heptaprenyl-1 4-Naphthoquinone Methyltransferase; Methyltransferase UbiE/COQ5 Family; Methyltransferase Domain Family Protein; Methyltransferase-UbiE; UbiE/COQ5 Family Methyltransferase

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRRRWLVVGIFALGIGLGWVLARRRPFSARLAWFLTLPGPRAIARPEELVALLDLQPAMYLLDAGAGPGRLTIPLAEVVG
PTGSVTAVDVQPRMLEYIRQRAAERGLTNVRLLLAELGRGTLAALGPETYDRALLVHVLGETDDPAATLRELAAVLRPGG
RLAVIEHIGDPHYVRYARVRELGEAAGLRLLQERRFLFGHTTVWEKPHDGATKGAA

Sequences:

>Translated_216_residues
MRRRWLVVGIFALGIGLGWVLARRRPFSARLAWFLTLPGPRAIARPEELVALLDLQPAMYLLDAGAGPGRLTIPLAEVVG
PTGSVTAVDVQPRMLEYIRQRAAERGLTNVRLLLAELGRGTLAALGPETYDRALLVHVLGETDDPAATLRELAAVLRPGG
RLAVIEHIGDPHYVRYARVRELGEAAGLRLLQERRFLFGHTTVWEKPHDGATKGAA
>Mature_216_residues
MRRRWLVVGIFALGIGLGWVLARRRPFSARLAWFLTLPGPRAIARPEELVALLDLQPAMYLLDAGAGPGRLTIPLAEVVG
PTGSVTAVDVQPRMLEYIRQRAAERGLTNVRLLLAELGRGTLAALGPETYDRALLVHVLGETDDPAATLRELAAVLRPGG
RLAVIEHIGDPHYVRYARVRELGEAAGLRLLQERRFLFGHTTVWEKPHDGATKGAA

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: COG2226

COG function: function code H; Methylase involved in ubiquinone/menaquinone biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 23625; Mature: 23625

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRWLVVGIFALGIGLGWVLARRRPFSARLAWFLTLPGPRAIARPEELVALLDLQPAMY
CCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCHHE
LLDAGAGPGRLTIPLAEVVGPTGSVTAVDVQPRMLEYIRQRAAERGLTNVRLLLAELGRG
EEECCCCCCEEEEEHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
TLAALGPETYDRALLVHVLGETDDPAATLRELAAVLRPGGRLAVIEHIGDPHYVRYARVR
CEECCCCCHHHHHHEEHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
ELGEAAGLRLLQERRFLFGHTTVWEKPHDGATKGAA
HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MRRRWLVVGIFALGIGLGWVLARRRPFSARLAWFLTLPGPRAIARPEELVALLDLQPAMY
CCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCHHE
LLDAGAGPGRLTIPLAEVVGPTGSVTAVDVQPRMLEYIRQRAAERGLTNVRLLLAELGRG
EEECCCCCCEEEEEHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
TLAALGPETYDRALLVHVLGETDDPAATLRELAAVLRPGGRLAVIEHIGDPHYVRYARVR
CEECCCCCHHHHHHEEHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
ELGEAAGLRLLQERRFLFGHTTVWEKPHDGATKGAA
HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA