| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221633450
Identifier: 221633450
GI number: 221633450
Start: 1460734
End: 1460859
Strand: Reverse
Name: 221633450
Synonym: trd_1472
Alternate gene names: NA
Gene position: 1460859-1460734 (Counterclockwise)
Preceding gene: 221633455
Following gene: 221633449
Centisome position: 72.93
GC content: 67.46
Gene sequence:
>126_bases GTGTGTGGACTCGATCCGTCCTTCCCCGCACTGCTTCGATCGGTCGGAGCAGTGCTCGTCGCCGAGAAGAGCGAGCGCCG GCCGGTGAGCTGCTGCGATCCGGGGAGCAGCCTCCTGCGGTGGTAA
Upstream 100 bases:
>100_bases CATCCCGCTCTCGGCCGCGAGTATAGCATTCTGGCGGCCCGCCGCTGTTGTCCTCCCGGTCGAGCAGCCCCGTCGCGCGA GGAGCGACTCGGCTCTCTGC
Downstream 100 bases:
>100_bases GATCAGGGCAGGTGAAGCGGAAAGAGGCCGAGTTCGGCCTGTTCTCCTGTATCCGAGAGGGGCCAGTCGCATGACCGCGA CCACCGAAAGCCGCCTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 41
Protein sequence:
>41_residues MCGLDPSFPALLRSVGAVLVAEKSERRPVSCCDPGSSLLRW
Sequences:
>Translated_41_residues MCGLDPSFPALLRSVGAVLVAEKSERRPVSCCDPGSSLLRW >Mature_41_residues MCGLDPSFPALLRSVGAVLVAEKSERRPVSCCDPGSSLLRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4404; Mature: 4404
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGLDPSFPALLRSVGAVLVAEKSERRPVSCCDPGSSLLRW CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MCGLDPSFPALLRSVGAVLVAEKSERRPVSCCDPGSSLLRW CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA