| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221633403
Identifier: 221633403
GI number: 221633403
Start: 1417696
End: 1417905
Strand: Reverse
Name: 221633403
Synonym: trd_1423
Alternate gene names: NA
Gene position: 1417905-1417696 (Counterclockwise)
Preceding gene: 221633404
Following gene: 221633402
Centisome position: 70.79
GC content: 60.0
Gene sequence:
>210_bases ATGACGGGATACAAGGCACTGACGCCGCGCCCCGATGAGCAGTTCGATCTTCTGCAGCTGGAGGCGATGGGGTTTACGCC CGATCAGATTGCCCGGCTGCGGGAGCTGCGGGACATGTACCCCTACATCGAGTACATGGATTCCCGAAAGCAGTGGAACC GGTTGCGCTTCGTCAAGTGGCTCTACTCGCGGGGTGCTATCCCGCGATAA
Upstream 100 bases:
>100_bases GGTTCTCTGCTATACTTCTGGTGCGAGTCGGCCGATCTCATCGGAGACGGTGGCGACTCGACACCGCGCGCGGGGGCGCG CGTGGACAGGGAGGCGAGCG
Downstream 100 bases:
>100_bases GCGAAGAGGGATCGCTCGGGGCGGGGCGTCCTGCGCCCCGCTTTTTGTTTCCGCCCGGTCGGCTGTGTACACTTGCGGGG CAACCAACGGCGGTTGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKWLYSRGAIPR
Sequences:
>Translated_69_residues MTGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKWLYSRGAIPR >Mature_68_residues TGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKWLYSRGAIPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8444; Mature: 8313
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKW CCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSRGAIPR HHHCCCCCC >Mature Secondary Structure TGYKALTPRPDEQFDLLQLEAMGFTPDQIARLRELRDMYPYIEYMDSRKQWNRLRFVKW CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSRGAIPR HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA