| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is ntaB [H]
Identifier: 221633371
GI number: 221633371
Start: 1380885
End: 1381379
Strand: Reverse
Name: ntaB [H]
Synonym: trd_1391
Alternate gene names: 221633371
Gene position: 1381379-1380885 (Counterclockwise)
Preceding gene: 221633372
Following gene: 221633370
Centisome position: 68.97
GC content: 66.46
Gene sequence:
>495_bases ATGATCGATCCCCGGCACTTCCGGCGGACGATGGGTCGGTTCGCGACGGGGGTGACGGTCATTACCGTGGCGCGCCCGGA AGGAGCACACGGGATGACGGCCAATGCCTTTCTGTCCGTCTCGCTCGATCCGCCGCTCGTCCTGGTTTCGGTCGATCGGC GGGCACGGATGCACGCTTATTTGCTCGAAGCCACCCGCTATGGTGTGAGCGTGCTCGCCCGCGACCAGGAGCGGGCGGCG CGGCATTTTGCCGGTAAGCCGCAAGCTGGGTACGAACCGGTCTTCGCCTGGCGGGAGGGAGTACCGCTCCTGGAGGGGGC AGTCGCGCAGGTGGTTTGCGACGTGTGGGAGCGGGTGCCGGCGGGGGACCACACGCTGGTGTTGGGACGCGTGCGCTGGC TGGACTATTGGGAGCGCGAGCCGCTCGTTTTCTTCGGTGGTGACTTCCGCTGCCTGGAGGTTCAGCTGCACGATACCAGC ATGTGGTGGTGGTGA
Upstream 100 bases:
>100_bases GCGCTCGATATCCTGCGCCGCAAGCGCGCAGCCGAAGGAGCGGGCGATGCACGCGAACCAGCCGCAGCCGAGCGATCAGC TGATTGACGAACCAGCCCCG
Downstream 100 bases:
>100_bases ACCGCGCGGCTGTGGAAGGGAGAGGGGACGTGACGATCGCCAAGTCGGTCGTGCACGCGGGACGATTGCCCACCCATTTT CATCGGGCAGGAAGTGGAGA
Product: StyB protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: NTA monooxygenase component B; NTA-MO B [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MIDPRHFRRTMGRFATGVTVITVARPEGAHGMTANAFLSVSLDPPLVLVSVDRRARMHAYLLEATRYGVSVLARDQERAA RHFAGKPQAGYEPVFAWREGVPLLEGAVAQVVCDVWERVPAGDHTLVLGRVRWLDYWEREPLVFFGGDFRCLEVQLHDTS MWWW
Sequences:
>Translated_164_residues MIDPRHFRRTMGRFATGVTVITVARPEGAHGMTANAFLSVSLDPPLVLVSVDRRARMHAYLLEATRYGVSVLARDQERAA RHFAGKPQAGYEPVFAWREGVPLLEGAVAQVVCDVWERVPAGDHTLVLGRVRWLDYWEREPLVFFGGDFRCLEVQLHDTS MWWW >Mature_164_residues MIDPRHFRRTMGRFATGVTVITVARPEGAHGMTANAFLSVSLDPPLVLVSVDRRARMHAYLLEATRYGVSVLARDQERAA RHFAGKPQAGYEPVFAWREGVPLLEGAVAQVVCDVWERVPAGDHTLVLGRVRWLDYWEREPLVFFGGDFRCLEVQLHDTS MWWW
Specific function: Hydroxylation of nitrilotriacetate [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011991 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 18705; Mature: 18705
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPRHFRRTMGRFATGVTVITVARPEGAHGMTANAFLSVSLDPPLVLVSVDRRARMHAY CCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHH LLEATRYGVSVLARDQERAARHFAGKPQAGYEPVFAWREGVPLLEGAVAQVVCDVWERVP HHHHHHHCHHEEECCHHHHHHHCCCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHCC AGDHTLVLGRVRWLDYWEREPLVFFGGDFRCLEVQLHDTSMWWW CCCCEEEEEEEEEHHHCCCCCEEEECCCEEEEEEEEECCEECCC >Mature Secondary Structure MIDPRHFRRTMGRFATGVTVITVARPEGAHGMTANAFLSVSLDPPLVLVSVDRRARMHAY CCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCHHHHHH LLEATRYGVSVLARDQERAARHFAGKPQAGYEPVFAWREGVPLLEGAVAQVVCDVWERVP HHHHHHHCHHEEECCHHHHHHHCCCCCCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHCC AGDHTLVLGRVRWLDYWEREPLVFFGGDFRCLEVQLHDTSMWWW CCCCEEEEEEEEEHHHCCCCCEEEECCCEEEEEEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892809; 9023192; 1735711 [H]