| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633331
Identifier: 221633331
GI number: 221633331
Start: 1343874
End: 1344359
Strand: Reverse
Name: 221633331
Synonym: trd_1351
Alternate gene names: NA
Gene position: 1344359-1343874 (Counterclockwise)
Preceding gene: 221633332
Following gene: 221633330
Centisome position: 67.12
GC content: 64.2
Gene sequence:
>486_bases GTGCTTCGGGAGGAAGCGATGGCGCGAATCGTCATCACGATCGAGGGAGACTCGCAAGAGATTGGGGCGATTCAGGAAGT TCTGCAACGACTCGCTGGACTGACGACAGGAGAGTTCGAGGTCAGTGAGGGTGTGCGACCACTCGGTGAGCGTGAACCGT GGACGTTCGAAGAGTTCCGGCAGTTCTGGAGCCGCCTGCAGGACGGTGCGCGGCAGATCCTGGCGGAGATCGCCAAGCGC CCTGAGGGGTACCCGATGGTGGATCTCGAGCGGGCGCTGGGGGTACCAGCCCGCGTTATCGGTGGGCGACTCAGTTCGGT TGGCCACGCGATGCGGCGTTTCCCACACAAAGAGGAGCCGGTCGAGTTTCGGACGGGTGGCGACGATGCTCCAGGCCGGC GGATCTACTTCATGAGGCCGGAGGTCGCACGCATGATCCGGCGACTGGTCAGTGAGGGGGCCAGCGCCGACGGTGCTGAG TCCTGA
Upstream 100 bases:
>100_bases GAACACTCAGGGAGAGTGATTCGGAAGAAAAAGGGTGGATAGGAGGGCTTGCGCGCAATGCAGAGTGAGAGTATGATTCC TGTGTTGATAGTGTGAATCG
Downstream 100 bases:
>100_bases AGAGATCGGCGCTCGAGAAAGGCGGGGAGGTGCGCACCAGCGTGCCTCCCCGTTTCGCGTCCGCAACGCCTGTTTCGGCC GGCTCGCGATCCAGCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFRQFWSRLQDGARQILAEIAKR PEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEPVEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAE S
Sequences:
>Translated_161_residues MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFRQFWSRLQDGARQILAEIAKR PEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEPVEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAE S >Mature_161_residues MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFRQFWSRLQDGARQILAEIAKR PEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEPVEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAE S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18095; Mature: 18095
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFR CCCHHCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCHHHHH QFWSRLQDGARQILAEIAKRPEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEP HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC VEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAES CEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLREEAMARIVITIEGDSQEIGAIQEVLQRLAGLTTGEFEVSEGVRPLGEREPWTFEEFR CCCHHCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCHHHHH QFWSRLQDGARQILAEIAKRPEGYPMVDLERALGVPARVIGGRLSSVGHAMRRFPHKEEP HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC VEFRTGGDDAPGRRIYFMRPEVARMIRRLVSEGASADGAES CEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA