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The map label for this gene is xerC [H]

Identifier: 221633310

GI number: 221633310

Start: 1320540

End: 1321520

Strand: Reverse

Name: xerC [H]

Synonym: trd_1329

Alternate gene names: 221633310

Gene position: 1321520-1320540 (Counterclockwise)

Preceding gene: 221633317

Following gene: 221633307

Centisome position: 65.98

GC content: 62.9

Gene sequence:

>981_bases
ATGGCGAGCCGAGACCAGGAGGGGCAGCGGCTACCGGTCATGCAACCGCCGCTCTTCGAACTGGGAAGCGATGGCAAGCT
GCGGGGAGCGGTCGGGTTCCTGCCAGTCTTGACACCCGATTCTTCGCTCGACGTGGCGCGCTTCTGGTTTCGCCGGTATC
TCGAGCAGTCCGGTCATCCTCCCAATACGGTCAAATCGTACAGCTATGATCTGGCGGTCTTCGAATCGCTCGTCGGCCCG
AAGCCGATCCGGGAGATCGACGAGCGAGATGTGGCGACTTTTCTGAACGAGAGCCGCGGACGGTCGACGCGCAAGCGGCG
ATTGACGACGCTCTCGACGTTTTACAAATTCTTGATCACTCGTGCCAAAGTGGTCGAGATCGATCCGACTGCTGCGTTCT
ACTCGGATCGTATCCCGCTCAAGACACCGCAACCGTTGTTTGCCGACGAACAGGCGCGCTTGCTCGAGGCTGCTGCTGCC
GAAGGACCACGAACGCACCTCGCGATCTGGCTGATGCTGCGACTCGGCCTCTCCCGTCACGAGGTGATCGCGCTCCGCGC
TGCCCACATCGACTGGAGCGATCCCGAACACCCGATCGTCTATGTCTTCGCTGAGCAACCGAAGCGCCGACTGCGCGAGC
GCAAGCTGGCAGCCAACCGGGAGCTGACCGAGATCTACCACCAGCTAGTGGAGGAAGAAGGCCCACAGGACCGGCTCGTG
CCGATCCTGCCACAGTCGCTCAACAAGATGGTTGAGCGAGTGGCGAAGGCAGCCGGGATCGAGAAGCTGGTGACACCCCA
GACGCTGCGCCACACCTTCGCGGTCGAGCAAGCCAAACGTGGTGCCACCGAGGACGAGCTCCTGGAACTTCTCGGGCTAG
CGGACGATGCACGGAACCGGCTGAGCGTGCAACGCTATCTCCGCTTGGCGGCTCCGCCGATCGAGCCCCGCGGGGTGACG
AGCGAGCGGAACGCTCGCTAA

Upstream 100 bases:

>100_bases
GAGCGGGTTCTATCGGAGCATGTCGTGCGCGCTTCCTTGACAGCCGCGAGCGACCGGGGTACGCTGCAAGTGGCAGAACA
TTTGTGCGCCTGGGGGTGCC

Downstream 100 bases:

>100_bases
AGGCGTTCGCGGAGCGGGAGCTGAGCGAGGACGACATCCAAGGCCATCGGCAAGGGCTGCGCATTGTCGACGACGAGATG
GCGTAGCCCGGGGATCGGTT

Product: putative site-specific recombinase, phage integrase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MASRDQEGQRLPVMQPPLFELGSDGKLRGAVGFLPVLTPDSSLDVARFWFRRYLEQSGHPPNTVKSYSYDLAVFESLVGP
KPIREIDERDVATFLNESRGRSTRKRRLTTLSTFYKFLITRAKVVEIDPTAAFYSDRIPLKTPQPLFADEQARLLEAAAA
EGPRTHLAIWLMLRLGLSRHEVIALRAAHIDWSDPEHPIVYVFAEQPKRRLRERKLAANRELTEIYHQLVEEEGPQDRLV
PILPQSLNKMVERVAKAAGIEKLVTPQTLRHTFAVEQAKRGATEDELLELLGLADDARNRLSVQRYLRLAAPPIEPRGVT
SERNAR

Sequences:

>Translated_326_residues
MASRDQEGQRLPVMQPPLFELGSDGKLRGAVGFLPVLTPDSSLDVARFWFRRYLEQSGHPPNTVKSYSYDLAVFESLVGP
KPIREIDERDVATFLNESRGRSTRKRRLTTLSTFYKFLITRAKVVEIDPTAAFYSDRIPLKTPQPLFADEQARLLEAAAA
EGPRTHLAIWLMLRLGLSRHEVIALRAAHIDWSDPEHPIVYVFAEQPKRRLRERKLAANRELTEIYHQLVEEEGPQDRLV
PILPQSLNKMVERVAKAAGIEKLVTPQTLRHTFAVEQAKRGATEDELLELLGLADDARNRLSVQRYLRLAAPPIEPRGVT
SERNAR
>Mature_325_residues
ASRDQEGQRLPVMQPPLFELGSDGKLRGAVGFLPVLTPDSSLDVARFWFRRYLEQSGHPPNTVKSYSYDLAVFESLVGPK
PIREIDERDVATFLNESRGRSTRKRRLTTLSTFYKFLITRAKVVEIDPTAAFYSDRIPLKTPQPLFADEQARLLEAAAAE
GPRTHLAIWLMLRLGLSRHEVIALRAAHIDWSDPEHPIVYVFAEQPKRRLRERKLAANRELTEIYHQLVEEEGPQDRLVP
ILPQSLNKMVERVAKAAGIEKLVTPQTLRHTFAVEQAKRGATEDELLELLGLADDARNRLSVQRYLRLAAPPIEPRGVTS
ERNAR

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37082; Mature: 36951

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRDQEGQRLPVMQPPLFELGSDGKLRGAVGFLPVLTPDSSLDVARFWFRRYLEQSGHP
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHHCCCC
PNTVKSYSYDLAVFESLVGPKPIREIDERDVATFLNESRGRSTRKRRLTTLSTFYKFLIT
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RAKVVEIDPTAAFYSDRIPLKTPQPLFADEQARLLEAAAAEGPRTHLAIWLMLRLGLSRH
HHHEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
EVIALRAAHIDWSDPEHPIVYVFAEQPKRRLRERKLAANRELTEIYHQLVEEEGPQDRLV
HEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PILPQSLNKMVERVAKAAGIEKLVTPQTLRHTFAVEQAKRGATEDELLELLGLADDARNR
HHCHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHH
LSVQRYLRLAAPPIEPRGVTSERNAR
HHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASRDQEGQRLPVMQPPLFELGSDGKLRGAVGFLPVLTPDSSLDVARFWFRRYLEQSGHP
CCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHHCCCC
PNTVKSYSYDLAVFESLVGPKPIREIDERDVATFLNESRGRSTRKRRLTTLSTFYKFLIT
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RAKVVEIDPTAAFYSDRIPLKTPQPLFADEQARLLEAAAAEGPRTHLAIWLMLRLGLSRH
HHHEEEECCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
EVIALRAAHIDWSDPEHPIVYVFAEQPKRRLRERKLAANRELTEIYHQLVEEEGPQDRLV
HEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PILPQSLNKMVERVAKAAGIEKLVTPQTLRHTFAVEQAKRGATEDELLELLGLADDARNR
HHCHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHH
LSVQRYLRLAAPPIEPRGVTSERNAR
HHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA