Click here to switch to the map view.

The map label for this gene is yqfF [H]

Identifier: 221633271

GI number: 221633271

Start: 1282214

End: 1284379

Strand: Reverse

Name: yqfF [H]

Synonym: trd_1290

Alternate gene names: 221633271

Gene position: 1284379-1282214 (Counterclockwise)

Preceding gene: 221633272

Following gene: 221633270

Centisome position: 64.12

GC content: 63.57

Gene sequence:

>2166_bases
GTGCTGTCGCGTATCGATCGCTTCTGGTCCGACTCTCTCCTGGTGTTCATCGCGCTGCGTCATCGAGCGCGCCATGTCCT
CGTCTGGCTCGGGGTCTTTTTCGTCCTGTGGGCCCCCCTCGCTGTGCTGGTCTACGGTGCCTGGGAAGCGAGCGGGATCA
CACTCCAGCCGGGGCAGATCGCCGACCGGACGATCAAAGCTCCGTACACAGCAACGTTCGAGTCGCGCTTGCTGACCCAG
CAAGCACGGCAAGAAGCCTACGACGATTCGCGCAATATCGTTCTCGTCCGCGATCCGGCGGTGGAGGCAGCCCAACTCGA
AGCGCTCAACCGGCTGCTCACTCAGCTGGACGCGATTCGAGCCCAACGGGGAACCGATCTGGCTGCGGCCACCCAGCAAG
CCCAGTCCGCTCTCGAAGGGTTGGGTGCGGAAGATGCCCAACTGCTGGTGAGCCTCTCGGATGCGAGCTGGGGCCGGATC
GAGGGGGAAGCCCGGCGGCTCCTGGCCAGCGTGCTCTCCGGTGAGGTTCGCTCGGACAACGTGGCGCAAATCAAGGAACA
GCTTCCGGACCGGGTATCGATCGAGTTAAACCCGGTCGAACGTCGGCTCGTCGTCGTTCTCGTCCGATCGTTCATTCGTC
CGAACGTCCGTGTGGATGAGCAAGCGACGCGCGCGGCACGCGAGGCGGCTGCTGCCGCTGTTTCTCCGGTCATGGTCACG
GTGCAAGCCGGACAGGTGATCGTTCGCGACGGTGATCCGGTCACGCCGGAGGCGCTGGAGAAGTTGGAGTACTTCGGGCT
GCTTTCGCCGCGCCAGTCCTGGCCTGAGTTCTTGGGATTGCTGGGCGTTCTGGCGCTGTGGGCAGGAGGCTTTGCCCTCG
CGCTCTATCGCTCAGTCCAGCATACGAGGCAGCCGCGCCAGCTCTTTTTGATCGTCGGCCTCGTGCTGCTGACGCTCGCG
GCTGGGCGTCTGCTGGTCACCATCCCCGAGTTCCGTTATTCGTTCCCGGTCGCCGGAACGGTGATGCTCTTCGCGGTCCT
CCTCGACTTGCGCACTGCGCTCTTAGCGAGCTGGTTTCTCGCATTGGCGCTCGGGATTCTCGATGGGTTCTCCTTGCTCA
CCACGCTGGTCGCCGGCTTCGGGAGCCTGGCCGGCGCGGTCGTCGTCTGGCGAGCCGAGCGGACGGTGACCTTCCTCTGG
GCGGGCATCGCCGTGGCAGCAGCGACCGCTGCGACGGCGCTGGCTGCACTGACCGCGCTCGGACGTCAAGTGGTCGACTG
GAACCTCGCGGGAAACGTGCTCTTGCAGAGCGGGATCAATGGGGTGCTCTCGGCGAGTCTCTGCTTTTTGTCCTTCAGCT
TGCTCGGTCGGTTACTCGGCATCACGACGCATCTCCAACTCATGGAACTGGCGCATCCGACGCAACCGCTTCTGTCCCGG
TTGGCAAGGGAGGCGCCGGGTACGTACCACCATAGTCTCGTCGTGGGTAACTTGGCAGAAGCAGCAGCCGAGGTCGTCGG
TGCCGACCCACTCCTGACTCGGGTGGGTGTACTCTACCACGATATCGGTAAAGTGCTGCACCCGGAGTTGTATGTGGAGA
ATCAAGCCAATCGCATCAACATTCACGATTCACTTGATCCGCTGACGAGTGCTCGCCTGATCGAGGAGCACGTGACAGAG
GGGGTCAAACTGGCCAAACGGGCACGCTTGCCCAAGCCGATCGTCGATATCATCCAGCAGCACCATGGGACGACCCTGAT
CAAGTACTTCTACGCCAAGGCGAAGGAAGCCGGCCTGGCTGTCGACGAGCAAGCGTTCCGCTATCCTGGGCCGCGACCGC
AGTCCAAGGAAGCTGCAGTCGTCATGCTGGCAGACAGCGTCGAGGCGGCGGTGCGAGCAGCCGCTCAGTCCGGGAAGTTG
TATGAGCCGGGTGATCCACACTCGGTGTCGAAGCGTCTCGCGGAGATCGTCGACCGCGTGATTCGCGAGCGCTTGGAGGA
CGGCCAGCTGGATGACGCCGATCTCACCTTCCGCCAGATCACGGAGATCCGGCGCGTCTTCCTCACCATGCTCGAGGGGG
TTTACCACCCACGTGTGGAATATCCGGAAGTTCGCCGCGAGCTGGTCGTGACTGGCGTGGACGAGCGGGCGGCGGCCGAG
GCATGA

Upstream 100 bases:

>100_bases
GAGGGACGTGCCATCGCCGAAGCAGCGCAGAAGGCGCTCGCTGAGGTCGCGGGGAGTTGACCTCGAGAGACAACGCAGCG
AATCGAGGTGACGAGCGCCG

Downstream 100 bases:

>100_bases
GCTGGCCACTCCGTGTCGGAATTCGCGTCAGCGAGGGGCTCGACCGGCCGGTCTCGGTACGGCGGCTGGCCCGCTTCCTC
CGTTTCGTCGCCGAGCGCGA

Product: 7TM-HD extracellular domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 721; Mature: 721

Protein sequence:

>721_residues
MLSRIDRFWSDSLLVFIALRHRARHVLVWLGVFFVLWAPLAVLVYGAWEASGITLQPGQIADRTIKAPYTATFESRLLTQ
QARQEAYDDSRNIVLVRDPAVEAAQLEALNRLLTQLDAIRAQRGTDLAAATQQAQSALEGLGAEDAQLLVSLSDASWGRI
EGEARRLLASVLSGEVRSDNVAQIKEQLPDRVSIELNPVERRLVVVLVRSFIRPNVRVDEQATRAAREAAAAAVSPVMVT
VQAGQVIVRDGDPVTPEALEKLEYFGLLSPRQSWPEFLGLLGVLALWAGGFALALYRSVQHTRQPRQLFLIVGLVLLTLA
AGRLLVTIPEFRYSFPVAGTVMLFAVLLDLRTALLASWFLALALGILDGFSLLTTLVAGFGSLAGAVVVWRAERTVTFLW
AGIAVAAATAATALAALTALGRQVVDWNLAGNVLLQSGINGVLSASLCFLSFSLLGRLLGITTHLQLMELAHPTQPLLSR
LAREAPGTYHHSLVVGNLAEAAAEVVGADPLLTRVGVLYHDIGKVLHPELYVENQANRINIHDSLDPLTSARLIEEHVTE
GVKLAKRARLPKPIVDIIQQHHGTTLIKYFYAKAKEAGLAVDEQAFRYPGPRPQSKEAAVVMLADSVEAAVRAAAQSGKL
YEPGDPHSVSKRLAEIVDRVIRERLEDGQLDDADLTFRQITEIRRVFLTMLEGVYHPRVEYPEVRRELVVTGVDERAAAE
A

Sequences:

>Translated_721_residues
MLSRIDRFWSDSLLVFIALRHRARHVLVWLGVFFVLWAPLAVLVYGAWEASGITLQPGQIADRTIKAPYTATFESRLLTQ
QARQEAYDDSRNIVLVRDPAVEAAQLEALNRLLTQLDAIRAQRGTDLAAATQQAQSALEGLGAEDAQLLVSLSDASWGRI
EGEARRLLASVLSGEVRSDNVAQIKEQLPDRVSIELNPVERRLVVVLVRSFIRPNVRVDEQATRAAREAAAAAVSPVMVT
VQAGQVIVRDGDPVTPEALEKLEYFGLLSPRQSWPEFLGLLGVLALWAGGFALALYRSVQHTRQPRQLFLIVGLVLLTLA
AGRLLVTIPEFRYSFPVAGTVMLFAVLLDLRTALLASWFLALALGILDGFSLLTTLVAGFGSLAGAVVVWRAERTVTFLW
AGIAVAAATAATALAALTALGRQVVDWNLAGNVLLQSGINGVLSASLCFLSFSLLGRLLGITTHLQLMELAHPTQPLLSR
LAREAPGTYHHSLVVGNLAEAAAEVVGADPLLTRVGVLYHDIGKVLHPELYVENQANRINIHDSLDPLTSARLIEEHVTE
GVKLAKRARLPKPIVDIIQQHHGTTLIKYFYAKAKEAGLAVDEQAFRYPGPRPQSKEAAVVMLADSVEAAVRAAAQSGKL
YEPGDPHSVSKRLAEIVDRVIRERLEDGQLDDADLTFRQITEIRRVFLTMLEGVYHPRVEYPEVRRELVVTGVDERAAAE
A
>Mature_721_residues
MLSRIDRFWSDSLLVFIALRHRARHVLVWLGVFFVLWAPLAVLVYGAWEASGITLQPGQIADRTIKAPYTATFESRLLTQ
QARQEAYDDSRNIVLVRDPAVEAAQLEALNRLLTQLDAIRAQRGTDLAAATQQAQSALEGLGAEDAQLLVSLSDASWGRI
EGEARRLLASVLSGEVRSDNVAQIKEQLPDRVSIELNPVERRLVVVLVRSFIRPNVRVDEQATRAAREAAAAAVSPVMVT
VQAGQVIVRDGDPVTPEALEKLEYFGLLSPRQSWPEFLGLLGVLALWAGGFALALYRSVQHTRQPRQLFLIVGLVLLTLA
AGRLLVTIPEFRYSFPVAGTVMLFAVLLDLRTALLASWFLALALGILDGFSLLTTLVAGFGSLAGAVVVWRAERTVTFLW
AGIAVAAATAATALAALTALGRQVVDWNLAGNVLLQSGINGVLSASLCFLSFSLLGRLLGITTHLQLMELAHPTQPLLSR
LAREAPGTYHHSLVVGNLAEAAAEVVGADPLLTRVGVLYHDIGKVLHPELYVENQANRINIHDSLDPLTSARLIEEHVTE
GVKLAKRARLPKPIVDIIQQHHGTTLIKYFYAKAKEAGLAVDEQAFRYPGPRPQSKEAAVVMLADSVEAAVRAAAQSGKL
YEPGDPHSVSKRLAEIVDRVIRERLEDGQLDDADLTFRQITEIRRVFLTMLEGVYHPRVEYPEVRRELVVTGVDERAAAE
A

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 78768; Mature: 78768

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRIDRFWSDSLLVFIALRHRARHVLVWLGVFFVLWAPLAVLVYGAWEASGITLQPGQI
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH
ADRTIKAPYTATFESRLLTQQARQEAYDDSRNIVLVRDPAVEAAQLEALNRLLTQLDAIR
HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
AQRGTDLAAATQQAQSALEGLGAEDAQLLVSLSDASWGRIEGEARRLLASVLSGEVRSDN
HHCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCH
VAQIKEQLPDRVSIELNPVERRLVVVLVRSFIRPNVRVDEQATRAAREAAAAAVSPVMVT
HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEE
VQAGQVIVRDGDPVTPEALEKLEYFGLLSPRQSWPEFLGLLGVLALWAGGFALALYRSVQ
EECCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTRQPRQLFLIVGLVLLTLAAGRLLVTIPEFRYSFPVAGTVMLFAVLLDLRTALLASWFL
HCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALALGILDGFSLLTTLVAGFGSLAGAVVVWRAERTVTFLWAGIAVAAATAATALAALTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GRQVVDWNLAGNVLLQSGINGVLSASLCFLSFSLLGRLLGITTHLQLMELAHPTQPLLSR
HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LAREAPGTYHHSLVVGNLAEAAAEVVGADPLLTRVGVLYHDIGKVLHPELYVENQANRIN
HHHHCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCEEE
IHDSLDPLTSARLIEEHVTEGVKLAKRARLPKPIVDIIQQHHGTTLIKYFYAKAKEAGLA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC
VDEQAFRYPGPRPQSKEAAVVMLADSVEAAVRAAAQSGKLYEPGDPHSVSKRLAEIVDRV
CCHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
IRERLEDGQLDDADLTFRQITEIRRVFLTMLEGVYHPRVEYPEVRRELVVTGVDERAAAE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCC
A
C
>Mature Secondary Structure
MLSRIDRFWSDSLLVFIALRHRARHVLVWLGVFFVLWAPLAVLVYGAWEASGITLQPGQI
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH
ADRTIKAPYTATFESRLLTQQARQEAYDDSRNIVLVRDPAVEAAQLEALNRLLTQLDAIR
HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
AQRGTDLAAATQQAQSALEGLGAEDAQLLVSLSDASWGRIEGEARRLLASVLSGEVRSDN
HHCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCH
VAQIKEQLPDRVSIELNPVERRLVVVLVRSFIRPNVRVDEQATRAAREAAAAAVSPVMVT
HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEE
VQAGQVIVRDGDPVTPEALEKLEYFGLLSPRQSWPEFLGLLGVLALWAGGFALALYRSVQ
EECCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTRQPRQLFLIVGLVLLTLAAGRLLVTIPEFRYSFPVAGTVMLFAVLLDLRTALLASWFL
HCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALALGILDGFSLLTTLVAGFGSLAGAVVVWRAERTVTFLWAGIAVAAATAATALAALTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GRQVVDWNLAGNVLLQSGINGVLSASLCFLSFSLLGRLLGITTHLQLMELAHPTQPLLSR
HHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LAREAPGTYHHSLVVGNLAEAAAEVVGADPLLTRVGVLYHDIGKVLHPELYVENQANRIN
HHHHCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCEEE
IHDSLDPLTSARLIEEHVTEGVKLAKRARLPKPIVDIIQQHHGTTLIKYFYAKAKEAGLA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC
VDEQAFRYPGPRPQSKEAAVVMLADSVEAAVRAAAQSGKLYEPGDPHSVSKRLAEIVDRV
CCHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
IRERLEDGQLDDADLTFRQITEIRRVFLTMLEGVYHPRVEYPEVRRELVVTGVDERAAAE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]