| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633232
Identifier: 221633232
GI number: 221633232
Start: 1234456
End: 1234743
Strand: Reverse
Name: 221633232
Synonym: trd_1250
Alternate gene names: NA
Gene position: 1234743-1234456 (Counterclockwise)
Preceding gene: 221633233
Following gene: 221633231
Centisome position: 61.64
GC content: 61.46
Gene sequence:
>288_bases ATGGAGATCGGGACCTTCTTACTGATGCTGGCTCTGAGCTACGGGTTCGGTGTCCTCTGGTACGATCTTCTTCCTGGTCG TTTGCCGGAGCGGGTGTGGCGCGTTGCGGCCTATCCGTTTCTCGGGATCTGGATTGCCGAACAGCTCCCGGCGTTCGGGC CGGCTTTCGGCGGTATCCACTTGATCCATGCGGCGGTCGGTTCGCTCGTCGCAGTTCTCGTCGACTGGGTGATCAATCAA GCACGGCGACCAGCGATCGTGCAGCAGTTCGAGGCACGAGCGGCGTGA
Upstream 100 bases:
>100_bases TGGAATCGCGTTGCGCGTGATCGCAGCCCGTACTATACTCATTCTCGTCAAGACATAACGAGAAAGCCCGGCCTCCGTCG AAGGGAAACGGAGGTGAGCC
Downstream 100 bases:
>100_bases GCGCGGAATGAGCCGGGCTTTCTCGAGGTACGGGCCCTGGAGCATTGCTCTGGGGCTCGTCTGGTATACTCGCCTTGCTC GCGGTCCTGCGGCCGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MEIGTFLLMLALSYGFGVLWYDLLPGRLPERVWRVAAYPFLGIWIAEQLPAFGPAFGGIHLIHAAVGSLVAVLVDWVINQ ARRPAIVQQFEARAA
Sequences:
>Translated_95_residues MEIGTFLLMLALSYGFGVLWYDLLPGRLPERVWRVAAYPFLGIWIAEQLPAFGPAFGGIHLIHAAVGSLVAVLVDWVINQ ARRPAIVQQFEARAA >Mature_95_residues MEIGTFLLMLALSYGFGVLWYDLLPGRLPERVWRVAAYPFLGIWIAEQLPAFGPAFGGIHLIHAAVGSLVAVLVDWVINQ ARRPAIVQQFEARAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10505; Mature: 10505
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGTFLLMLALSYGFGVLWYDLLPGRLPERVWRVAAYPFLGIWIAEQLPAFGPAFGGIH CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LIHAAVGSLVAVLVDWVINQARRPAIVQQFEARAA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MEIGTFLLMLALSYGFGVLWYDLLPGRLPERVWRVAAYPFLGIWIAEQLPAFGPAFGGIH CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LIHAAVGSLVAVLVDWVINQARRPAIVQQFEARAA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA